Gene Bcenmc03_6303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6303 
Symbol 
ID6125227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp308551 
End bp309867 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID641647317 
Productmajor facilitator superfamily metabolite/H(+) symporter 
Protein accessionYP_001773914 
Protein GI170734800 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.429838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCCT CACCATCAAC CGCGCCGGAT GGCACGGCCG CAGGCACGTC GAAGCTCGGC 
GCGGTCCTGC GCGTGACCAG CGGCAATTTT CTCGAACAGT TCGACTTTTT CCTGTTCGGC
TTCTATGCGA CCAGCATCTC GCGGGTCTTC TTTCCGGCGG CAAGCGAGTT CGCCTCGCTG
CTGCTGACGT TTGCCGTGTT CGGCGCCGGT TTCCTGATGC GCCCGCTCGG TGCGATCGTG
CTCGGCGCCT ACATCGACGA AGTAGGAAGA CGCAAAGGAC TGATCGTCAC GCTCTCGATC
ATGGCGAGCG GCACGATCCT GATCGCGTGC GTGCCGGGGT ACGCGACGAT CGGGCTTGCC
GCACCGGCGC TGGTGTTGCT GGGACGCCTG CTGCAGGGCT TCTCCGCCGG AGCCGAGCTG
GGCGGCGTGT CGGTCTATCT CGCGGAAATG GCCACGCCCG GGCACAAGGG CTTCTATACG
AGCTGGCAGT CGGCGAGCCA GCAGGTCGCG ATCGTCGTCG CGGCAGCCGT GGGCTATCTG
CTGAATCATC TGCTGACGAG CCAGGAAATC GGTGCGTGGG GCTGGCGCAT CCCGTTCTTC
ATCGGTTGCG CGATCGTGCC GGTCATTTTC GTGCTTCGCC GAACGCTGCA GGAAACGGAC
GAATTCAGGG CGCGCACCCA TCATCCGCGA GCACGCGAGG TGTTCGCGAC GATGCTGCGG
AATTGGCGCA CCGTGTTTGC CGGCATGCTG CTCGTCGCCA TGACCACGAC GACGTTCTAC
CTCATCACGG TCTACACGCC GACGTTCGGC AGGGCCGTCC TGAAACTGTC CACGGCGGAC
AGCCTGATCG TCACGCTGTG CGTGGGCGTG TCGAATTTCT TCTGGCTGCC CGTCGGCGGT
GCGCTGTCGG ACCGCATCGG ACGCAAGCCG ATTCTCGTGG CCATCGCGGT CGCGGCCATC
GTGACGTCGT ATCCCGCGCT TGCCTGGCTG TCATCCGCGC CCAGCTTCGG CCGCATGCTG
GCCGTGCTGT TGTGGCTCTC GTTCTTCTTC GGCATGTACA ACGGCGCGAT GGTCGCGGCG
CTGACCGAAA TCATGCCCGC CAGCGTCCGC GTGGCCGGTT TCTCGCTTGC ATTCAGCCTC
GCGACCGCGG TCTTCGGCGG CTTCACGCCG GCGGTGTCGA CCTATCTGAT CGAGGTGACG
GGCGACAAGG CCGCGCCCGG CTACTGGCTC AGCTTCGCCG CGTGCTGCGG GTTGCTCGCG
ACACTGTCGT TGTATCGCAA AGGCGGGACG GCGCGGCGTT CGGCGTCGCC TGCGTGA
 
Protein sequence
MHPSPSTAPD GTAAGTSKLG AVLRVTSGNF LEQFDFFLFG FYATSISRVF FPAASEFASL 
LLTFAVFGAG FLMRPLGAIV LGAYIDEVGR RKGLIVTLSI MASGTILIAC VPGYATIGLA
APALVLLGRL LQGFSAGAEL GGVSVYLAEM ATPGHKGFYT SWQSASQQVA IVVAAAVGYL
LNHLLTSQEI GAWGWRIPFF IGCAIVPVIF VLRRTLQETD EFRARTHHPR AREVFATMLR
NWRTVFAGML LVAMTTTTFY LITVYTPTFG RAVLKLSTAD SLIVTLCVGV SNFFWLPVGG
ALSDRIGRKP ILVAIAVAAI VTSYPALAWL SSAPSFGRML AVLLWLSFFF GMYNGAMVAA
LTEIMPASVR VAGFSLAFSL ATAVFGGFTP AVSTYLIEVT GDKAAPGYWL SFAACCGLLA
TLSLYRKGGT ARRSASPA