Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6303 |
Symbol | |
ID | 6125227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 308551 |
End bp | 309867 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641647317 |
Product | major facilitator superfamily metabolite/H(+) symporter |
Protein accession | YP_001773914 |
Protein GI | 170734800 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.429838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCCT CACCATCAAC CGCGCCGGAT GGCACGGCCG CAGGCACGTC GAAGCTCGGC GCGGTCCTGC GCGTGACCAG CGGCAATTTT CTCGAACAGT TCGACTTTTT CCTGTTCGGC TTCTATGCGA CCAGCATCTC GCGGGTCTTC TTTCCGGCGG CAAGCGAGTT CGCCTCGCTG CTGCTGACGT TTGCCGTGTT CGGCGCCGGT TTCCTGATGC GCCCGCTCGG TGCGATCGTG CTCGGCGCCT ACATCGACGA AGTAGGAAGA CGCAAAGGAC TGATCGTCAC GCTCTCGATC ATGGCGAGCG GCACGATCCT GATCGCGTGC GTGCCGGGGT ACGCGACGAT CGGGCTTGCC GCACCGGCGC TGGTGTTGCT GGGACGCCTG CTGCAGGGCT TCTCCGCCGG AGCCGAGCTG GGCGGCGTGT CGGTCTATCT CGCGGAAATG GCCACGCCCG GGCACAAGGG CTTCTATACG AGCTGGCAGT CGGCGAGCCA GCAGGTCGCG ATCGTCGTCG CGGCAGCCGT GGGCTATCTG CTGAATCATC TGCTGACGAG CCAGGAAATC GGTGCGTGGG GCTGGCGCAT CCCGTTCTTC ATCGGTTGCG CGATCGTGCC GGTCATTTTC GTGCTTCGCC GAACGCTGCA GGAAACGGAC GAATTCAGGG CGCGCACCCA TCATCCGCGA GCACGCGAGG TGTTCGCGAC GATGCTGCGG AATTGGCGCA CCGTGTTTGC CGGCATGCTG CTCGTCGCCA TGACCACGAC GACGTTCTAC CTCATCACGG TCTACACGCC GACGTTCGGC AGGGCCGTCC TGAAACTGTC CACGGCGGAC AGCCTGATCG TCACGCTGTG CGTGGGCGTG TCGAATTTCT TCTGGCTGCC CGTCGGCGGT GCGCTGTCGG ACCGCATCGG ACGCAAGCCG ATTCTCGTGG CCATCGCGGT CGCGGCCATC GTGACGTCGT ATCCCGCGCT TGCCTGGCTG TCATCCGCGC CCAGCTTCGG CCGCATGCTG GCCGTGCTGT TGTGGCTCTC GTTCTTCTTC GGCATGTACA ACGGCGCGAT GGTCGCGGCG CTGACCGAAA TCATGCCCGC CAGCGTCCGC GTGGCCGGTT TCTCGCTTGC ATTCAGCCTC GCGACCGCGG TCTTCGGCGG CTTCACGCCG GCGGTGTCGA CCTATCTGAT CGAGGTGACG GGCGACAAGG CCGCGCCCGG CTACTGGCTC AGCTTCGCCG CGTGCTGCGG GTTGCTCGCG ACACTGTCGT TGTATCGCAA AGGCGGGACG GCGCGGCGTT CGGCGTCGCC TGCGTGA
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Protein sequence | MHPSPSTAPD GTAAGTSKLG AVLRVTSGNF LEQFDFFLFG FYATSISRVF FPAASEFASL LLTFAVFGAG FLMRPLGAIV LGAYIDEVGR RKGLIVTLSI MASGTILIAC VPGYATIGLA APALVLLGRL LQGFSAGAEL GGVSVYLAEM ATPGHKGFYT SWQSASQQVA IVVAAAVGYL LNHLLTSQEI GAWGWRIPFF IGCAIVPVIF VLRRTLQETD EFRARTHHPR AREVFATMLR NWRTVFAGML LVAMTTTTFY LITVYTPTFG RAVLKLSTAD SLIVTLCVGV SNFFWLPVGG ALSDRIGRKP ILVAIAVAAI VTSYPALAWL SSAPSFGRML AVLLWLSFFF GMYNGAMVAA LTEIMPASVR VAGFSLAFSL ATAVFGGFTP AVSTYLIEVT GDKAAPGYWL SFAACCGLLA TLSLYRKGGT ARRSASPA
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