| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6279 |
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| Symbol | |
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| ID | 6125205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 282332 |
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| End bp | 283000 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641647295 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001773892 |
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| Protein GI | 170734778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.138045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.720875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGT TTGAACCGAA GTACATCACC TTCGACTGCT ACGGCACGCT GACCCATTTC
CGGATGGCCG AGACGGCGCG CGAAATCTAT GCGGACCGGC TGTCGCCGGC CACGATGGAG
GCCTTCGTGC GCGCGTTCGC CGCCTACCGG CTCGACGAGG TGCTCGGCGC GTGGAAGCCG
TACCGCGACG TCGTCGTCAA CGCGATCCGC CGCACCTGCG CGCGGGTCGG CGTGACGTTC
GACGAAGCCG AGGCCGAGCT TTTCTATCAT GCGGTGCCGA CCTGGGGCCC GCATCCGGAC
GTGCCGGCCG GGCTGTCGCG GCTGGCGACC AAGTACAAGC TCGTGATCCT GTCGAACGCG
ATGGACGAGC AGATCATGAG CAACGTCGAC AAGCTCGGCG CGCCGTTCCA CGCGGTGTTC
ACCGCGCAGC AGGCGCAATC GTACAAGCCG CGGATGCAGG GCTTCGAATA CATGTTCGAC
AAGCTCGGCT GCAAACCCGA GGACGTACTG CACGTGTCGT CGAGCCTGCG CTACGACCTG
ATGACGGCCG AGGATCTGGG GATCAAGCAC AAGGCGTTCG TGAACCGCGG CCACGAGCCG
GGCACGCCGT TCTACAACTA TTACGAAGTG TCGGACATCG GCCAGCTCGC GACGCAGCTC
GGGCTGTAA
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| Protein sequence | MIQFEPKYIT FDCYGTLTHF RMAETAREIY ADRLSPATME AFVRAFAAYR LDEVLGAWKP
YRDVVVNAIR RTCARVGVTF DEAEAELFYH AVPTWGPHPD VPAGLSRLAT KYKLVILSNA
MDEQIMSNVD KLGAPFHAVF TAQQAQSYKP RMQGFEYMFD KLGCKPEDVL HVSSSLRYDL
MTAEDLGIKH KAFVNRGHEP GTPFYNYYEV SDIGQLATQL GL
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