| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6275 |
|---|
| Symbol | |
|---|
| ID | 6125201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 276325 |
|---|
| End bp | 277206 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641647291 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001773888 |
|---|
| Protein GI | 170734774 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.33039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0650452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTG CCGCCCCGGC CCCCGACCAG CCGCGCAAGC GCCGCGGCGC GCGCATCGCG
TTGACGACCG GCGGCCGCGT CGGCCTGTCG ATGGTCGGCC TGATGCTGTT CGTCGCGGTG
TTCGCACCGC TGATCGCGCC GCATGACGTC GGCGCGATCG TCACGCCGGA CGTGTTCGCG
CCGTTCAGCG CGAAGCTGCC GTTCGGCTCC GACTTCCTCG GCCGCGACAT GCTGAGCCGA
ATCCTGTACG GCGCGCGGCT GACCGTGCTG CTCGCGCTGG CCGCGGTGCT GCTCGCCGCG
GTGACCGGCA CGACGCTCGG GCTGCTCGCG ACCGTGTCGG GCCGCGCGGT CGACGAGACG
ATGAGCCGGC TGCTCGACGC GCTCACGTCG ATTCCGTCGA AGATGTTCGC GCTGATGCTC
GTCGCCGCGT TCGGCTCGTC GCTGCCGCTG CTGGTGCTCA CCGCCGCGAT CAGCTACATG
CCCGGCTCGT ACCGGATCGC GCGGGCGCTG GCGGTCAACA TCAGCACGCT CGAATTCGTG
CAGGTGGCCA GGGCGCGCGG CGAAAGCGCG CTGTACATCG CGTGCGTCGA GATGCTGCCG
AACATGATCC ACCCGATGCT GGCGGATACC GGGCTGCGCT TCACGTTCGT CGTGCTGCTG
CTGAGCGGCC TGAGCTTTCT CGGGCTCGGC GTGCAGCCGC CGTATGCGGA CCTCGGTTCG
CTCGTGCGCG AGAACATCGC GAGCCTCGGC GACGGCTCGG CCGTCGCGAT CATTCCCGCG
GTCGCGATCG CGATCCTGAC GGTGGGCGTC AACCTGATGA TCGACGGCCT GCCGCATCGC
GGCCGCCGCA AGGGCGCGGC CGGCGCCGCC GGAGGACACT GA
|
|---|
| Protein sequence | MPPAAPAPDQ PRKRRGARIA LTTGGRVGLS MVGLMLFVAV FAPLIAPHDV GAIVTPDVFA
PFSAKLPFGS DFLGRDMLSR ILYGARLTVL LALAAVLLAA VTGTTLGLLA TVSGRAVDET
MSRLLDALTS IPSKMFALML VAAFGSSLPL LVLTAAISYM PGSYRIARAL AVNISTLEFV
QVARARGESA LYIACVEMLP NMIHPMLADT GLRFTFVVLL LSGLSFLGLG VQPPYADLGS
LVRENIASLG DGSAVAIIPA VAIAILTVGV NLMIDGLPHR GRRKGAAGAA GGH
|
|---|
| |