Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6248 |
Symbol | |
ID | 6125175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 248548 |
End bp | 249129 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647265 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001773862 |
Protein GI | 170734748 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00704499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.924299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGGG TGATCGAGAC ACCTTTGCCG GGCGTGCTGC TGATCGAGCC CGGCGTGTTC GGCGATGCGC GCGGCTTTTT CGTCGAAAGC TTCCGGGCAA GCTGGCTGCG CGACGCCGGC GTCGACGCCA CCTTCGTGCA GGACAACCAG TCGCGCTCGC GGCGCGGCGT GCTGCGCGGG CTGCACTACC AGCGGGTGAA TCCGCAAGGC AAATTGGTGC ACGCGGCGCG CGGCGCGGTC TACGACGTCG CCGTCGACAT CCGGTATGGC TCGCCGTTCT TCGGCTGCTG GTTCGGTGCG CAGCTCGACG ACGTATCGCA CCGGATGCTA TGGATTCCGC CCGGCTTCGC GCACGGCTTT TGCGTGTTGT CCGACGAGGC TGATTTCGCG TACAAGTGCA CGCAGTACTA CGATCCCGAT TCGGATGCGG GCGTGCGCTG GGACGATCCG GCGATCGGCA TCGACTGGCC GGATTCCGGC GCACCGTATC AGTTGTCGGA CAAGGATCGG CGGCAGCCGC CGCTCGCCGA ACTCGCCGCC GGTGCGCCGG CGATGTTGCC AGCCTACGGG AGCGCGCAAT GA
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Protein sequence | MTRVIETPLP GVLLIEPGVF GDARGFFVES FRASWLRDAG VDATFVQDNQ SRSRRGVLRG LHYQRVNPQG KLVHAARGAV YDVAVDIRYG SPFFGCWFGA QLDDVSHRML WIPPGFAHGF CVLSDEADFA YKCTQYYDPD SDAGVRWDDP AIGIDWPDSG APYQLSDKDR RQPPLAELAA GAPAMLPAYG SAQ
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