Gene Bcenmc03_6235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6235 
Symbol 
ID6124983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp236155 
End bp237090 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID641647252 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001773849 
Protein GI170734735 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.366894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGC CTACGCCGAT TCACCGCCGC TATACGGGCG CGTTCTCCGT CGCGCCGACG 
ATCTTCACCG AGTCGGGCGA GATCGACATG CCGGGCCAGA AGCGCTGTGT CGACTTCATC
ATCGACGCGG GAGCGGACGG CCTGTGCATC CTGGCGAACT ACTCGGAGCA GTTTTCGTTG
ACCGACGACG AGCGCGAGCG GCTCATCGCG GCGATCCTCG AACACGTGGC GGGGCGCGTA
CCGGTGATCG TGACGACCAC GCATTTCAGT CCGGCGATCT GCGCGGCGCG CAGCCGCGCC
GCGCAGGCGG CCGGTGCGTC GATGGTGATG GTGATGCCGC CGTACCACGG CGCGACGATT
CGTTGTGGCG AGGCTGCGAT CGAGCAGTTC TATGCGGAGC TTTCCGACGC GATCGCGATT
CCGATCATGT ACCAGGATGC GCCGATGAGC GGCACGCAGG TATCGGCCGC GTTTCTGGCG
CGCATCGCGC ACACGATTCC GAATCTGCGC TACTTCAAGA TCGAGGTGCC GCAATCGGCG
GCGAAGCTGC GCGAGCTGAT CGCGCTCGGC GGCGACGCGA TCGAGGGGCC GTTCGACGGC
GAGGAAGCGA TCACGCTGCT CGCCGATCTC GATGCGGGCG CAACCGGCAG CATCCTCGGC
GGCGGCTATC CGGACGGGCT GCGGCCGATT CTCGCCGCGT ATCTCGCCGG GCGGCGCGAC
GAGGCGGTCG CCCAGTACGA GCAATGGCTG CCGTTGATCA ATTACGAGAA CCGTCAGGCC
GGCCTGCTGG CGGCGAAGGC GCTGATGAAG GAGGGCGGCG TGATCGCATC GGACGCGCCG
CGCCGTCCGC TCGCGCCGCT GCATCCGGCC ACGCGCGCGG GCCTGATCGA GATCGCGCGA
CGGCTCGACG CGCGGGTGCT GCGCTGGGCA CGCTGA
 
Protein sequence
MSLPTPIHRR YTGAFSVAPT IFTESGEIDM PGQKRCVDFI IDAGADGLCI LANYSEQFSL 
TDDERERLIA AILEHVAGRV PVIVTTTHFS PAICAARSRA AQAAGASMVM VMPPYHGATI
RCGEAAIEQF YAELSDAIAI PIMYQDAPMS GTQVSAAFLA RIAHTIPNLR YFKIEVPQSA
AKLRELIALG GDAIEGPFDG EEAITLLADL DAGATGSILG GGYPDGLRPI LAAYLAGRRD
EAVAQYEQWL PLINYENRQA GLLAAKALMK EGGVIASDAP RRPLAPLHPA TRAGLIEIAR
RLDARVLRWA R