Gene Bcenmc03_6230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6230 
Symbol 
ID6124978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp231683 
End bp232537 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID641647247 
ProductNmrA family protein 
Protein accessionYP_001773844 
Protein GI170734730 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.365966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAA TAACGGGAGC ATCCGGGCAA CTCGGGCGCC TTGTGATCGA TGCATTGCTT 
GAAACCGTTC CGGCCGACCG GATCGTCGCG GCGGTCAGGA ATCCCGCGAA GGCACGCGAC
CTCGAGGCGC GCGGCGTGGT GGTGCGCGAG GCCGACTACA AGCGGCCGGA AACGCTCGCC
ACCGCGTTCG CCGGGGTCGA CAAACTTCTG CTGATCTCGT CGACCGAAGT CGCCGGGCGC
CTCCCGCTGC ATCGCGCGGT GATCGACGCG GCCCGGCGGG CGGAAGTCTC GCTGCTCGCC
TATACGAGCA TGCTGCACGC CGACACCTCG CCCGCCCGAC TCGCGATCGA GCACCGGCAG
ACGGAAGAAA TCATCGCGGC CGCCGGCCTT CCCGCCGTCA TCCTTCGCAA TGGCTGGTAC
ACCGAGAATC ATCTGATGGC CCTCCCCGCG GCGCTCGAGC ACGGCGCGTT CATCGGGGCC
GCGAAGGACG GGCGCTTCTC TTCCGCCGCG CGCAAGGACT ATGCGGCGGC CGCGGCCGTG
GTACTGGCGA CGGACGGTCA TGCAGGAAAA ACGTATGAAC TGGCGGGGGA CGATGCGTTC
ACGCTGACGC AACTGGCTGC CGAGGTTTCG CGGCAGTCCG GCAAGACCGT CGTCTACAAC
GATCTCGCGC AGGATGCTTA TGCAGACGCG CTGACGAGCG CCGGGCTGCC GCCCGAGTTT
GCCGGCGTCA TTGCCGATGC CGACGTGGCC GCGTCGCGCG GTGCGCTGTT CGACGATGGC
GGCGCCCTCG CGCGACTGAT CGGTCGACCC ACGACGCCGT TGGCGAGCGT CGTCGCGACC
GCGCTGCGCG GTTAA
 
Protein sequence
MYAITGASGQ LGRLVIDALL ETVPADRIVA AVRNPAKARD LEARGVVVRE ADYKRPETLA 
TAFAGVDKLL LISSTEVAGR LPLHRAVIDA ARRAEVSLLA YTSMLHADTS PARLAIEHRQ
TEEIIAAAGL PAVILRNGWY TENHLMALPA ALEHGAFIGA AKDGRFSSAA RKDYAAAAAV
VLATDGHAGK TYELAGDDAF TLTQLAAEVS RQSGKTVVYN DLAQDAYADA LTSAGLPPEF
AGVIADADVA ASRGALFDDG GALARLIGRP TTPLASVVAT ALRG