| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6226 |
|---|
| Symbol | |
|---|
| ID | 6124974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 227038 |
|---|
| End bp | 228420 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641647243 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001773840 |
|---|
| Protein GI | 170734726 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG AAACCGTAAT CGACATCGGC ACGGTGATCG AGCGGCAGCA GACCACCCGC
TTCGGTGTCC TGCTGATCGT CGCGATGGGC GTGATGATGA TGACCGAGGG CTACGACCTC
GCCGCGATGG CGTTCGCGGC CCCGGCGCTG AGCCGCGCGT GGCACCTCAA GCATGGCGTG
CTCGGCCCGG TATTCGGCGC ATTCGTATTC GGCACGATGA TCGGCGCGTT CGTGCTCGGC
TATCTCGGCG ACGTGATCGG CCGCAAACGC ATGATCGTGA TCGGCAGCGT CGTGCTCGCG
AGCTTCACGC TCGCCGCGTC ACGTGCCACC GGGCTCGAAC AGCTGCTGGT GCTGCGCTTT
CTGGCGGGTA TCGGCATCGG CGGCGTGGTG CCGAACGCGA TCGCGTATAC GACGGAGTTC
GCGCCGAAGC GCTGGCGCGC GACGTGGGTC ACGCTGATGT ACAGCGGCTA TACGATCGGC
AGCAGCGTGG GCGGTCTCGT GTCGGCGTGG CTCGTGCCGA AGTTCGGCTG GCAGGTGGTG
TTCGTGATCG GCGGCCTCGC GCCGCTCGTG TCGAGCGCGA TGTTGTGGTT CGCGGTGCCG
GAGTCGATCC GCTTCCTGAC GCTCAAGGGC CGTCACGCCG AAGTCGCGCG AATCGTCGCA
CGAATCGCGC CGGGCTTCGC CGTTGCGCCG CAGGCCCGCT TCGTGATCGG CGGCGCTTCG
CCGGGTCACA CGCACGAGCA CCGCCGCGAC GGCTCGCTGA GGCTGCTGTT CGCGGGCCGG
CTGAGTGCGC TGACGCCGGT GCTGTGGGCC GTCTATATCG CGAACTCGAT GGCGCTGTTT
TTTCTCAGCA GCTGGCTGCC GGTGCTGATC GAAAGCGTGG GCCTCGCACC GCGCGACGCG
GCGCTCGTCT CCACGATGTT CCAGGTCGGC GGCACGCTGG GCGGGCTCGC GCTGATGCGC
TTCGTCGACA CGCGCGGCGC CATCATCATC ACCGTGCTGC CGCTCGTCGG CACGCCGCTC
GTCGCGCTGC TCGGCACCGG ACTGCCCGCG CCGATGCTGG TCGCGGCGGT GTTCCTGACC
GGCTTCACGG TGGTCGGCAC GCAGTTTGGC CTGAACGCGG TCGCGGCGCT CGTCTATCCG
ACCGCGCTGC GCGCCAAAGG CACGGGCGCG GCGGTCGGTA TCCAGAAGAT CGGCGCGATC
GCCGGGCCGG TGATCGGCGG AATGCTGATG GCCGCGCATC TGCCGGTCGA ACGGATGTTC
TTTCTCGGCG CGGTGCCGGT CGCCTTCGTC GCGCTGCTCG CGTTCGCGCT CGGCCGCCTG
CATCGCCGCG GCGACGATGC CGCGCCGGAC AACGCCCAAA CAGGAGCCGC CCATGTCGCT
TGA
|
|---|
| Protein sequence | MSGETVIDIG TVIERQQTTR FGVLLIVAMG VMMMTEGYDL AAMAFAAPAL SRAWHLKHGV
LGPVFGAFVF GTMIGAFVLG YLGDVIGRKR MIVIGSVVLA SFTLAASRAT GLEQLLVLRF
LAGIGIGGVV PNAIAYTTEF APKRWRATWV TLMYSGYTIG SSVGGLVSAW LVPKFGWQVV
FVIGGLAPLV SSAMLWFAVP ESIRFLTLKG RHAEVARIVA RIAPGFAVAP QARFVIGGAS
PGHTHEHRRD GSLRLLFAGR LSALTPVLWA VYIANSMALF FLSSWLPVLI ESVGLAPRDA
ALVSTMFQVG GTLGGLALMR FVDTRGAIII TVLPLVGTPL VALLGTGLPA PMLVAAVFLT
GFTVVGTQFG LNAVAALVYP TALRAKGTGA AVGIQKIGAI AGPVIGGMLM AAHLPVERMF
FLGAVPVAFV ALLAFALGRL HRRGDDAAPD NAQTGAAHVA
|
|---|
| |