Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6209 |
Symbol | |
ID | 6124957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 209380 |
End bp | 210069 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641647226 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001773823 |
Protein GI | 170734709 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGATA CTGCCGCGTC GGAACTGCGC CATCTGTTCT CCTACTACAA CGCCGCGCTG CTGGTACAAG GCTTCGTTGC GACCCTCGTG CTCTCCGCCG TCGGGTGTGC CGCGGGCTTT GCCGTCGGGT TCGCCGTCGC CGTGGTCCGG GTGACGCGCA CCCGCGCGCT GGCACCTGCA CGAGCGCTGC TGTTCGCGTA TTGCCTCGTG TTCCGGCGTA TACCATTCCT CGTCACATTG ATGCTGGTGT TCTTCGCGAG CCAGTCGAGC GGCGCGAAGC TGTCGACATT TGCGGTCGCG CTCGTCAGCG TAAGCCTGAT TGCGTCGGCG TATCTCGGCG AAATCGTTCG AAGCGGGCTC GAATCCGTTC ATCCCAATCA GCGGGAGGCG GCCGTCACGC TGAATTTCGG CTACTTGAAA ATGCTGCGGT ACGTGGTTGT GCCGCAAGCC TGGCGGGTGA TCGTGCCGCC GACGTTCGGT TTTTTCGTCA TGTTCATCAA GGATACCGCG CTGGCCTCGC AGATCGGCGT GATGGAACTG ACGTCCGCCG GAAAGGTGCT CAACGACAAG GGATTTTCCG CTGGTCTCGT CTACGGCGCG ATTCTGTTGC TGTATTTCGC CATGTCTTAC CCGCTGTCGC GTTTTGGAAA GCATCTGGAG AAGAGCCTTG CCGCAACTCG AAATCGTTGA
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Protein sequence | MVDTAASELR HLFSYYNAAL LVQGFVATLV LSAVGCAAGF AVGFAVAVVR VTRTRALAPA RALLFAYCLV FRRIPFLVTL MLVFFASQSS GAKLSTFAVA LVSVSLIASA YLGEIVRSGL ESVHPNQREA AVTLNFGYLK MLRYVVVPQA WRVIVPPTFG FFVMFIKDTA LASQIGVMEL TSAGKVLNDK GFSAGLVYGA ILLLYFAMSY PLSRFGKHLE KSLAATRNR
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