Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6181 |
Symbol | |
ID | 6125155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 180870 |
End bp | 181940 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641647199 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001773796 |
Protein GI | 170734682 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.391334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCGT TGCTTCGCCG AAAGTCGCGC CTCGAACCGA AACTCGGTGC ACTCGTATTG GGCGCCGCAC TCGCGCTCGG TATGTCCGCG GCACACGCCG GCCCGCTCAA GGGCGCGCCC GCGCCGTTCG ACAAGGGCGG CGTGAAGATC GCGCTCGTCA ACTACCTGTC GACCGGCGAT TTCTTCCAGG CCTACGAAGC CGGCGCGCAG AAGCAGGCAC GCGCGCTCGG CATCGATCTG CGCATCTACG AAGGCCGGCA GGACGCGGCC GAGCAACGCG AGCAGATTCA GCAGGCGATC AGCATCGGCG TGTCCGCGAT CATCGTCAAT CACGGCTTGC CGGAATCGCT GAAGGACGTC GTTCAGCGCG CGCTCGACAA AGGCATCAAG GTCGTCGCGT TCGACGTCGA TCTCGCCAAT CCGAAGGTGC CGCAGATCGA GCAGAACGAT CGCGACCTCG CGAACCTGCT GCTCGATCAG GCCGTGAAGG ACAACGGCGA CGCGTTCTCT GCCGGGTACG TGTACGTGGC CGGATTCGCG CCGCTCGACC GGCGCGACGC CGCGTGGCGC GATTTCAAGC GCGCGCACCC GAAGGTGCAG GAAAAGGCGC GCTGGGGCAC CGTCGACAAT CCGATCGCGC AGTCGGTCGC GAACCAGGCG GCCGCTGCGT ACCGTGCGAA TCCCGACATT CGCGTCGTGT TCGCCCCGTA CGACGAGTTC GCGCGCGGCG CGAAGCTCGC GGCCGACGAG GCCAGGCTGT CGTCGAAAAT CCGCATCTAC AGCGCGGACG TGTCCACGGC CGACATCGCG GCCATCCGCG CGCCGAACAG CGCGTGGGTC GCGACGGCCG CGACCAATCC GGCGGTCGTC GGCGCGGTGT CGGTGCGGGC CGCGGCGTTG CTGGTCGCCG GGCAAAACCC GGGCGCGCGC ATCGCGGTCA AGCCGACGCT GATCACGCGC GACGACCTCG TGAAGAACGA CATTCATACC GTGGCCGAAC TCGGCGCGAA GTTTCCGGCG TTTCGCGCGA GCGACGCGGC GACGGCTGCG TGGATTCCGG CGCTCGACTG A
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Protein sequence | MRSLLRRKSR LEPKLGALVL GAALALGMSA AHAGPLKGAP APFDKGGVKI ALVNYLSTGD FFQAYEAGAQ KQARALGIDL RIYEGRQDAA EQREQIQQAI SIGVSAIIVN HGLPESLKDV VQRALDKGIK VVAFDVDLAN PKVPQIEQND RDLANLLLDQ AVKDNGDAFS AGYVYVAGFA PLDRRDAAWR DFKRAHPKVQ EKARWGTVDN PIAQSVANQA AAAYRANPDI RVVFAPYDEF ARGAKLAADE ARLSSKIRIY SADVSTADIA AIRAPNSAWV ATAATNPAVV GAVSVRAAAL LVAGQNPGAR IAVKPTLITR DDLVKNDIHT VAELGAKFPA FRASDAATAA WIPALD
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