| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6154 |
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| Symbol | |
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| ID | 6125128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 153754 |
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| End bp | 155166 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641647172 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001773769 |
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| Protein GI | 170734655 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.18096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG CGATCCTGTG CCCGTTGTCC GTTCGTGAGC GATGGTGCGT CGCGGTCCGG
CGCGCGTTGA CGCCCGGACG GCGCGGCACC GGCGCGCCGG ACGCATTCGC GCCGGCGGTG
GCCGGTGTCG GCCTGTCGAC GCCGATGACG CCGATGCGCG TGCCTTGGCC GGCGTTCGAG
CGCTGGTCCA CCGCCATTGC CCGTGCCGGC GACGGCCAGT CCGGCGGCGG CAGCGGCTCG
GGCGCAACGC CAGGCCGCAA CGGCGAGCAC TCGACCGACG CGCCGGGCGG CGGTGGCGGC
GACGACCATC CGCACGACGA TCGCGGCGGC CGCACCGGCG GCGACGGGGA TGGCAACGAC
GGCGACGGCG AACGCAAGCG GCCCGGCAAG AAGCCGCTGA TCATCCTGGG CGCGGTGGTG
TTGGTGCTGC TCATCGGTGG GCTCGTGTGG TGGTTCGCGA CGCGCAACCA GGAAAGCACC
GACGATGCGT ATACCGACGG CAACGCGATC GCGGTCGCGC CGCACGTGTC CGGCTACGTG
ACGCGCCTGG CGGTCGACGA CAACACCTTC GTGCGGCGCG GCGACGTGCT TGTCGAGATC
GATCCGCGCG ACTACCGCGC GCAGGTCGAC GCGGCGCAGG CCCAGCTCGG TCTCGCGCAG
GCGCAGCTCG ACGCGGCGCG CGTGCAGCTC GATATCGCGC GCGTGCAGTA TCCGGCCCAG
TACCGGCAGG CGCGCGCGCA GATCGAATCG GCGGAAGCCG CGTACCGGCA GGCGCTCGCC
GCGCAGTCCC GCCAGCGGGC GGTCGATGCG CGCGCAACCT CGCAGCAGGC GATCGACGCG
GCCGATGCGC AGCGCGCGAC CGCCGACGCG AACGTCGCGA TGGCCCAGGC GCAGGCGCGC
ACCGCGAGCC TCGTGCCGCA GCAGATCCGG CAGGCCGAGA CGGCCGTCGA GGAACGCCGC
CAGCAGGTGC TGCAGGCGCG CGCGCAGCTC GAGACGGCCA ACCTGAACCT GTCGTACTGC
GAGATGCGCG CGCCGTCCGA CGGCTGGGTC ACGCGGCGCA ACGTGCAACT GGGCTCGTTC
CTGCAACCGG GCACGTCGAT CTTCTCGATC GTCACGCCGC GCGTGTGGGT CACCGCGAAT
TTCAAGGAGT CGCAGCTCGA GCGGATGCGC ATCGGCGACC GCGTCGACGT GTCGGTCGAC
GCGTATCCCG ATCTCGACCT GCACGGCCAC GTCGACAGCA TCCAGCTCGG CAGCGGCTCG
CGCTTCTCCG CATTCCCGAC CGAGAACGCG ACCGGCAACT TCGTGAAGAT CGTGCAGCGC
GTGCCGGTGA AGATCGTGCT CGACGGCCCG CTGCCGACCC GTCCACCGCT CGGTCTCGGC
CTGTCGGCCG TGCCGACCGT CCACCTGAAA TGA
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| Protein sequence | MPDAILCPLS VRERWCVAVR RALTPGRRGT GAPDAFAPAV AGVGLSTPMT PMRVPWPAFE
RWSTAIARAG DGQSGGGSGS GATPGRNGEH STDAPGGGGG DDHPHDDRGG RTGGDGDGND
GDGERKRPGK KPLIILGAVV LVLLIGGLVW WFATRNQEST DDAYTDGNAI AVAPHVSGYV
TRLAVDDNTF VRRGDVLVEI DPRDYRAQVD AAQAQLGLAQ AQLDAARVQL DIARVQYPAQ
YRQARAQIES AEAAYRQALA AQSRQRAVDA RATSQQAIDA ADAQRATADA NVAMAQAQAR
TASLVPQQIR QAETAVEERR QQVLQARAQL ETANLNLSYC EMRAPSDGWV TRRNVQLGSF
LQPGTSIFSI VTPRVWVTAN FKESQLERMR IGDRVDVSVD AYPDLDLHGH VDSIQLGSGS
RFSAFPTENA TGNFVKIVQR VPVKIVLDGP LPTRPPLGLG LSAVPTVHLK
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