| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6147 |
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| Symbol | |
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| ID | 6125121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 147437 |
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| End bp | 149275 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641647165 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001773762 |
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| Protein GI | 170734648 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0509796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.360981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAG TGGCGGATTT CATCGTCGAG CGACTGTACG ACTGGGGCGT GCGCCGCATC
TACGGCTACC CGGGCGACGG CATCAACGGC TTTTTCGGCG CGCTGAACCG CGCGGACGGC
AGGATCGAAT TCATCCAGGC GCGCCACGAG GAGATGGCGG CCTTCATGGC GTCCGCGCAT
GCAAAATTTA CAGGCGAGCT GGGCGTATGC GTCGCGACGT CGGGGCCCGG CGCCGCGCAC
CTCGTGACGG GCCTGTACGA TGCGCGGCTC GATCACATGC CGGTGCTCGC GATCGTCGGC
CAGCAGGCGC GCGCGGCGCT CGGCGGCCAC TATCAGCAGG AAGTGGATCT GCCGGCGCTT
TTCAAGGACG TTGCAGGCGC ATTCGTTCAG CTTGCGACGG TGCCGGGCCA GGTGCGCCAT
CTGGTCGACC GCGCAGTGCG CACGGCGCTC GGTGCGCGCA CGGTCACCGC GCTCGTGCTG
CCGAACGACC TGCAGGAGCT CGACTACGCG CCGCCCAAGC GCGCGCACGG CACCGTGCAT
TCGGGCGTCG GCTATACCGC GCCGAAAGTC GTGCCGTATG CGGACGACCT GCGGCGCGCG
GCCGACGTGC TCAATGCGGG GTCGAAAGTC GCGATGCTGG TGGGTGCCGG CGCGCTGAAG
GCGACCGACG AGGTGATCGC GGTAGCCGAC CGGCTCGGCG CGGGCGCCGC GAAAGCGCTG
CTCGGCAAGG CCGCGCTGCC GGACGACCTG CCGTGGGTCA CCGGCTCGAT CGGGCTGCTC
GGCACCCAGC CGAGCTACGA ACTGATGACC GAATGCGACA CGCTGCTGGT CGTCGGCTCC
GGCTTTCCAT ATTCGGAATT CCTGCCGAAG GAAGGCCAGG CGCGCGGCGT GCAGATCGAC
CTGAAGGCCG ACATGCTGAG CCTGCGCTAC CCGATGGAGG TCAACCTCGT CGGTGACAGC
GCCGAGACGC TGCGCGCGCT GCTGCCGCTG CTGAACGAGC GGCGCGATAC CGCGTGGCGC
GACCGGATCG CGAAATGGAA CCATGACTGG CACGACACGC TCGCGGCGCG CGCGGCCGCG
AAGGCCAGCG CCGGGCGCGG CGTGAATCCG CAGCGCGCGT TTACCGAGCT GTCGCCGCGC
CTGCCCGACG ACGTGATCCT GACGAGCGAT TCGGGCTCCT GCGCGAACTG GTATGCGCGC
GACCTGATGA TGCGGCGCGG GATGATGGGT TCGTTGTCCG GTGGCCTCGC GTCGATGGGC
GCCGCGGTGC CCTACGCGAT CGCCGCGAAA TTCGCGTACC CGGTGCGCCC GGTGATCGCG
ATGGTCGGCG ACGGCGCGAT GCAGATGAAC AACATGGCCG AGTTGATCAC GGTCGCCAAA
TACTGGCGCC AGTGGCCCGA CCCGCGCTGG ATCTGCATGG TGCTGAACAA CGAGGACCTG
AATCAGGTCA CGTGGGAGCA GCGCGTGATG GAAGGCGACC CGAAGTTCGA CGCGTCGCAG
CAGATCCCGA ACGTGCCGTA CTACCGCTTC GCGACGCTGC TCGGCCTCAA GGGCATCTAC
GTCGACGATC CGGAACAGCT CGGCGCCGCG TGGGACGAAG CGCTCGCGTC CGACCGGCCG
GTCGTGCTCG AGGTGAAGAG CGACCCCGAG GTGCCGCCGC TGCCACCGCA CGTGACGCTG
CAGCAGGCGA AGCATTTCGC CGAAACGCTG GTGAAAGGCG ACCCGCGCGA GGGCAACGTG
ATCGTCGAGA CCGCGCGGCA GGTATTGTCG GCCGTGCTGC CGGGCGACCA CGGCGACAAG
GCCGGCAAGG GCAGCAAGGA CGGGAAAGGC GAATCGTAA
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| Protein sequence | MATVADFIVE RLYDWGVRRI YGYPGDGING FFGALNRADG RIEFIQARHE EMAAFMASAH
AKFTGELGVC VATSGPGAAH LVTGLYDARL DHMPVLAIVG QQARAALGGH YQQEVDLPAL
FKDVAGAFVQ LATVPGQVRH LVDRAVRTAL GARTVTALVL PNDLQELDYA PPKRAHGTVH
SGVGYTAPKV VPYADDLRRA ADVLNAGSKV AMLVGAGALK ATDEVIAVAD RLGAGAAKAL
LGKAALPDDL PWVTGSIGLL GTQPSYELMT ECDTLLVVGS GFPYSEFLPK EGQARGVQID
LKADMLSLRY PMEVNLVGDS AETLRALLPL LNERRDTAWR DRIAKWNHDW HDTLAARAAA
KASAGRGVNP QRAFTELSPR LPDDVILTSD SGSCANWYAR DLMMRRGMMG SLSGGLASMG
AAVPYAIAAK FAYPVRPVIA MVGDGAMQMN NMAELITVAK YWRQWPDPRW ICMVLNNEDL
NQVTWEQRVM EGDPKFDASQ QIPNVPYYRF ATLLGLKGIY VDDPEQLGAA WDEALASDRP
VVLEVKSDPE VPPLPPHVTL QQAKHFAETL VKGDPREGNV IVETARQVLS AVLPGDHGDK
AGKGSKDGKG ES
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