| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6141 |
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| Symbol | |
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| ID | 6125116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 138682 |
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| End bp | 140142 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641647160 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001773757 |
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| Protein GI | 170734643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCCA AACCCATCGT TGCCGCGGCG CTGGCCGCCC TCTTGTCGGC GGGGTGTGCC
GTCGGTCCCG ACTATGCGCG GCCGGACGTG GCGATGCCGC GGCAGTTCCA GGGGCAGCGC
GCCGTGGATC AGCGCCACGC GGCGGCCGAC GCCGATCTCG CGACGTGGTG GACGGGCTTC
GGCGATCCGC AATTGACGCG CTACATCACG CTGGCGCTCG CGCAGAACCT CGATCTTGCG
CAGGCCGCGG CGCGCGTCGC GCAGGCGCGC GCGGGGCTCG GCGCGGCGAA TGCGGCGCTG
CTGCCGTCCG GCAATGTGAG CGGCCAGGCC GCGCGCGTCT ACCAGTCGGT CGAAACGCCG
TTGGGGCAGG TGTTGAATGC GACGCCCGGT TTCGACCGTC ATGGCAATGA CTACGAGGCC
GATTTCAACG CGAGCTGGGA GCTGGACGTA TTCGGCGGAT TGCGCCGCGG CCGCGAAGCG
GCGCTCGCCG ACTATCAGGC CTCCGAAGCG GCGGCGGTCG CGACGCGGCT CGCCGTCGCC
GCGCAAACCG CGGATACCTA CATCACGATT CGCGGGTTGC AGGGCCGGCT CGACGTCGCG
CGGCACCAGG TGCAGACCGA GCAGGATTTG CTGTCGACCC TCAACCTCCT CTATGGAAAG
GGCCTCGCGG CGGAGCTTCA GGTGCGGCAG GCCGAAGGCG CGCTCGCGCA GGTTCGTGCC
ACGGTGCCGG TGCTCGAAGC GGCGCTGGAC GCGGCGATGA ATGCGCTCGA CGTGATGCTC
GGCACGCAGC CCGGCACGCA TCGCGCGGAA TTGCTCGCCG GCGGCGAGAT TCCGGTCACG
CCGCGGATCG CGGCGACGGG CACGCCCGGC GAACTGCTGC GGCGCCGGCC CGACCTGATC
GCCGCCGAGC GGCGCGTGGC GGCGTCGAAC GCACGCATCG GCGTGGCGAT TGCCGAGTAT
TACCCGAAGT TCTCGCTGGG CGGGTTGATC GGCAGCGCGA CGACGATAGG CGCGGGCAAC
CTGTTTGCCG GCGGCGCGAA CCAGGCTGCG GGCGTGCTCG GCTTGCGCTG GCGTCTGTTC
GATTTCGGCC GGATCAACGC GCAGATCGCG CAGGCCAAAG GGCAGGATGC CGAAATGCTG
GCCGCGTATC GGCTCGCGGC GCTGCATGCG ACCGAGGACG TCGAGAATGC ATTCTCCGCG
CTCGTCAAGC GTGACGAGCA GGCGGCGATT CTCGGTGACG GTGTGAAGTC GCTCGGCCGC
GCGCGGGCCG CGTCGTTCGC GGCTTACCAG AAAGGGGTCG TCAGCCTGAT CGAAGTGTTG
CAGGCGGACG AAAGCCTGCT GCGCGCGTCC GACGAACGCG TGCAGGCGCG AACCGAATCG
GCGCGTGCGG CGGTGGCTGC ATTCAAGGCG CTCGGCGGTG GGTGGCAGGC GCCGGAAGCG
CAGGCCGTTG CGAGTCGGTA G
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| Protein sequence | MLPKPIVAAA LAALLSAGCA VGPDYARPDV AMPRQFQGQR AVDQRHAAAD ADLATWWTGF
GDPQLTRYIT LALAQNLDLA QAAARVAQAR AGLGAANAAL LPSGNVSGQA ARVYQSVETP
LGQVLNATPG FDRHGNDYEA DFNASWELDV FGGLRRGREA ALADYQASEA AAVATRLAVA
AQTADTYITI RGLQGRLDVA RHQVQTEQDL LSTLNLLYGK GLAAELQVRQ AEGALAQVRA
TVPVLEAALD AAMNALDVML GTQPGTHRAE LLAGGEIPVT PRIAATGTPG ELLRRRPDLI
AAERRVAASN ARIGVAIAEY YPKFSLGGLI GSATTIGAGN LFAGGANQAA GVLGLRWRLF
DFGRINAQIA QAKGQDAEML AAYRLAALHA TEDVENAFSA LVKRDEQAAI LGDGVKSLGR
ARAASFAAYQ KGVVSLIEVL QADESLLRAS DERVQARTES ARAAVAAFKA LGGGWQAPEA
QAVASR
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