| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6134 |
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| Symbol | benD |
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| ID | 6125109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 129467 |
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| End bp | 130243 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641647153 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001773750 |
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| Protein GI | 170734636 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC AACGATTCTC CGGCAAGGTC GTCGTCGTCA CCGGCGCGGC GCAGGGCATC
GGCCGCGGTG TCGCGCTGCG CGCGGCGGCC GAGGGCGGCA AGGTGCTGTT CGTCGATCGC
GCGGATTTCG TCGCCGACGT GGCGGCCGAG GCGACCGGTG GCGAGACGGC AGGCTTCGTC
GCCGATCTCG AAACCTATGA GGGCGCGCAC GCGTCGATCG CGTATGCAGT GCAGCGGTTC
GGCGGCATCG ACATCCTGAT CAACGGCGTC GGCGGCGCGA TTCGCATGCG TCCGTTCGCC
GAGTTCGAAC CGGCGCAGAT CGACGCGGAA ATCCGCCGCT CGCTGATGCC GACGCTCTAT
ACCTGTCACG CGGCGCTGCC GCACCTGATC GCGCGCGGCG GCGGCACGAT CGTCAACATC
TCGTCGAACG CGACGCGCGG CATTCGCCGC GTGCCGTATT CGGCGGCGAA GGGCGGCGTG
AACGCGCTGA CGTCGGCGCT CGCGATGGAA TACGCGGAAC ACAACATCCG CGTCGTCGCC
ACCGCGCCGG GCGGCACCAG CGCGCCGCCG CGCCGCGTGC CGCGCAATGC GGCCGGCGAC
ACCGAGCAGG AACAGGCGTG GATGGGCGAG GCCGTGCGGC AGGTGACGGA ATCGACGTAC
TTCAAGCGCT ACGGCAGCCT CGACGAGCAG ATCGCGCCGA TCCTGTTCCT CGCGTCGGAC
GAGGCGAGCT ACATCACCGG CACGGTACTG CCGGTCGCGG GCGGCGATAC GGGTTGA
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| Protein sequence | MTMQRFSGKV VVVTGAAQGI GRGVALRAAA EGGKVLFVDR ADFVADVAAE ATGGETAGFV
ADLETYEGAH ASIAYAVQRF GGIDILINGV GGAIRMRPFA EFEPAQIDAE IRRSLMPTLY
TCHAALPHLI ARGGGTIVNI SSNATRGIRR VPYSAAKGGV NALTSALAME YAEHNIRVVA
TAPGGTSAPP RRVPRNAAGD TEQEQAWMGE AVRQVTESTY FKRYGSLDEQ IAPILFLASD
EASYITGTVL PVAGGDTG
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