Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6108 |
Symbol | |
ID | 6125083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 98608 |
End bp | 100998 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641647127 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001773724 |
Protein GI | 170734610 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.296471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTCA ACATCAGAAC ACGCCGGGCG ATCTCGAGCC AGGCATCAGG GGTTGCCATC GCGGTCGCCG TTGCACAGGT TTTCATCGCG GCGTCGGCGC ATGCACAACA GGCTGCCCAG CAGTCATGGC ATCTCGCGAG CGGTCCGCTG GACCGGACGC TGGTCGAAAT CGCCCAGGCG GCCAACGTGA GGTTGAGCTA CGACGCGGGT CTCGTGCAAT CGTTGAAATC GTCTCCCGTG GAGGGCAGCT ACACCGCCGA GGCCGCGATT CGACAAGCGC TCCGAGGCAC CGGCCTCGAT CTCGTCGCGA CGGGCAGCGG TGGTCTGACC ATTCAGAAGG CGGTTGCGAA GCCGGCCGCG GCGGTGCCCC TCGCGGCGTC GGCGGCGGCA GCCTCCGTGG GGCCTGTCGA TACCACGCTT CCGCTCATCA GCGTGGCAGC CAGCCGGGAC TCCGGCGGCA CCGGCTTCGT CGCGGAATCG TCGTCCACCT ATGCGCGATC GGACGTGCCG CTGAGCCAGA CGCCGAAATC GGTCAGCGTC ATCAACGCGG CGGTGATCCA GAGCCAGGCC GCTCAGTCGC TCTCCGATGT GCTGAGGAAT GCTTCCGGTG TCGTCACGCG GCCGGGGCCG CTGGGCGTGC CGACTTACAC GATTCGCGGG TTCGCGGCAT CCAACCTGAC CTCGGACGGG CTCGCCACGG TGGGCTCGGC GCCCAACGTC ACGCCGACGA TCGCTATCTC GAGCGTGGAA GTGGTCAAGG GGCCCTCGGC CATCGTGAAT GGCAACAGTC CGCCGGGAGG CGTCATCAAT CTCGTCAAGA AGACGCCGCA GGCCGAGCCG TTTCACGAAA TCCAGGTGGG CTACGGTTCC TACGGCAGCG AGCAGATCGC GCTGGACAGC ACGGGCGCCA TCACCGCCGA CAAGAAGCTT CGGTATCGCT TCATCATCTC GGGCGAGCGG GTCGGCCAGA ATTCGATGGG ATATGACGGC GAGAGAAATT TCTACTTTGC CCCGACCCTG GAATGGAAGG ATTCGACCAC GGATCTGACG GTGGGCTATG AGCGCACGGT CAATCGCGAG CCGGTTCCCC CGTTCACCGT CGGCTATGCC AAGGGCGACA TCTATCGAAA CTATATCGAC AGGCCGCTGG GCACGCCGTC CGACCATTTC GGCGCGCAAA CGGACAATAT TTTCTTTCAC CTCGAACAAA AGCTCGGCAC GGCGCTGACC TTCGTGAGCA AGGGTTCCTA TACGCGGACC GAACAAACGC AGCAAGCCTG GACAACGGCG ACGCCGCTCT CGGCGACCAA CGGCACGTTG TTCCACAACT TCGATTCGGT CTCCGATTTC TACAGTTGGA GCTTCCAGAA TTACCTGCGA GCCAAGTTCG ATATCGGCGC TGCGAAAAAT ACGGTGATTG CGGGCTGGGA CGTTCTTCGC TACAGCCAGC ATCAGTCTGA CACCACGACA TCGAAATTCA TTTCCATTCC AAATGTCTTC GGCTCATTTA CGCTTCCGTC TCCCGACACC GGAAACGTGA TGCCGAATAA CACTACCTAC TTCACTCAAA CCGGTTTATA TCTACAAGAT CAGTTTTCCT ATAAGAATTT CCATGCGCTC GCGTCCGTGC GCCGGGATAC CTATCTGACA CATGCGACCT ACGCCGGTAA CCCACCAGCG GGAAGCCATC AGAACGCCTA TAGCCCGAGC CTCGGCCTGC TCTACGAACT GACGTCCGAG GTTGCCGTCT ACGCCAGCTA CAACCGTGGC TTCCAGCCGG GCCAGGCGCT TCAATTCGGT GGCGGTGTGC TCCCTCCGCA AATCAGCCAG CAAGTCGAAG TGGGCATGAA GTTCAACCTG CTGGACGACA AGCTGGCCAT CACGACCTCG GCCTACCGCA CCTCGTTCAG CAACTACAAC GTCAACGATC CGCTCCATCG CGGTTTCTCT ATTCCCGTCG GCGGTGCCGT CAGCCGGGGA TTCGAAGCAG AGATCAACGG CCAGCCGCTG CCCGGCGTCA ACGTGGTCGG CACCTACACG TACAACGACT TCGTGCAGCC CCCGGCCGCC AAGATCGGGG TAAACCTGCC CAAGAACAGC GCCAGCCTGT GGACGACCTA CAACTTCCAG ACCGAAAAGC TCCAGGGTTT CGGGGTTGGC GCGGGGCTCT TCTTCGCGAG CGGGCAGTAC ATCGGCTCGG GCTCGGCGTA CCGCATCCCC AGTCAGGTGG AGACGGATCT CGGCCTGTTC TATCGGAAGA AGGGGTACGG CTTGAATCTT TCGATCAAGA ACGTGTTCAA CCGCAAGCTT TACTACAGCA GCACGTCGGC CGCCATGATT CCGATGGGTC CGGAGCGGAC GGTCATGCTG ACCGGAACCT ATGACTTCTG A
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Protein sequence | MKLNIRTRRA ISSQASGVAI AVAVAQVFIA ASAHAQQAAQ QSWHLASGPL DRTLVEIAQA ANVRLSYDAG LVQSLKSSPV EGSYTAEAAI RQALRGTGLD LVATGSGGLT IQKAVAKPAA AVPLAASAAA ASVGPVDTTL PLISVAASRD SGGTGFVAES SSTYARSDVP LSQTPKSVSV INAAVIQSQA AQSLSDVLRN ASGVVTRPGP LGVPTYTIRG FAASNLTSDG LATVGSAPNV TPTIAISSVE VVKGPSAIVN GNSPPGGVIN LVKKTPQAEP FHEIQVGYGS YGSEQIALDS TGAITADKKL RYRFIISGER VGQNSMGYDG ERNFYFAPTL EWKDSTTDLT VGYERTVNRE PVPPFTVGYA KGDIYRNYID RPLGTPSDHF GAQTDNIFFH LEQKLGTALT FVSKGSYTRT EQTQQAWTTA TPLSATNGTL FHNFDSVSDF YSWSFQNYLR AKFDIGAAKN TVIAGWDVLR YSQHQSDTTT SKFISIPNVF GSFTLPSPDT GNVMPNNTTY FTQTGLYLQD QFSYKNFHAL ASVRRDTYLT HATYAGNPPA GSHQNAYSPS LGLLYELTSE VAVYASYNRG FQPGQALQFG GGVLPPQISQ QVEVGMKFNL LDDKLAITTS AYRTSFSNYN VNDPLHRGFS IPVGGAVSRG FEAEINGQPL PGVNVVGTYT YNDFVQPPAA KIGVNLPKNS ASLWTTYNFQ TEKLQGFGVG AGLFFASGQY IGSGSAYRIP SQVETDLGLF YRKKGYGLNL SIKNVFNRKL YYSSTSAAMI PMGPERTVML TGTYDF
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