Gene Bcenmc03_6108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6108 
Symbol 
ID6125083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp98608 
End bp100998 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content61% 
IMG OID641647127 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001773724 
Protein GI170734610 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.296471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTCA ACATCAGAAC ACGCCGGGCG ATCTCGAGCC AGGCATCAGG GGTTGCCATC 
GCGGTCGCCG TTGCACAGGT TTTCATCGCG GCGTCGGCGC ATGCACAACA GGCTGCCCAG
CAGTCATGGC ATCTCGCGAG CGGTCCGCTG GACCGGACGC TGGTCGAAAT CGCCCAGGCG
GCCAACGTGA GGTTGAGCTA CGACGCGGGT CTCGTGCAAT CGTTGAAATC GTCTCCCGTG
GAGGGCAGCT ACACCGCCGA GGCCGCGATT CGACAAGCGC TCCGAGGCAC CGGCCTCGAT
CTCGTCGCGA CGGGCAGCGG TGGTCTGACC ATTCAGAAGG CGGTTGCGAA GCCGGCCGCG
GCGGTGCCCC TCGCGGCGTC GGCGGCGGCA GCCTCCGTGG GGCCTGTCGA TACCACGCTT
CCGCTCATCA GCGTGGCAGC CAGCCGGGAC TCCGGCGGCA CCGGCTTCGT CGCGGAATCG
TCGTCCACCT ATGCGCGATC GGACGTGCCG CTGAGCCAGA CGCCGAAATC GGTCAGCGTC
ATCAACGCGG CGGTGATCCA GAGCCAGGCC GCTCAGTCGC TCTCCGATGT GCTGAGGAAT
GCTTCCGGTG TCGTCACGCG GCCGGGGCCG CTGGGCGTGC CGACTTACAC GATTCGCGGG
TTCGCGGCAT CCAACCTGAC CTCGGACGGG CTCGCCACGG TGGGCTCGGC GCCCAACGTC
ACGCCGACGA TCGCTATCTC GAGCGTGGAA GTGGTCAAGG GGCCCTCGGC CATCGTGAAT
GGCAACAGTC CGCCGGGAGG CGTCATCAAT CTCGTCAAGA AGACGCCGCA GGCCGAGCCG
TTTCACGAAA TCCAGGTGGG CTACGGTTCC TACGGCAGCG AGCAGATCGC GCTGGACAGC
ACGGGCGCCA TCACCGCCGA CAAGAAGCTT CGGTATCGCT TCATCATCTC GGGCGAGCGG
GTCGGCCAGA ATTCGATGGG ATATGACGGC GAGAGAAATT TCTACTTTGC CCCGACCCTG
GAATGGAAGG ATTCGACCAC GGATCTGACG GTGGGCTATG AGCGCACGGT CAATCGCGAG
CCGGTTCCCC CGTTCACCGT CGGCTATGCC AAGGGCGACA TCTATCGAAA CTATATCGAC
AGGCCGCTGG GCACGCCGTC CGACCATTTC GGCGCGCAAA CGGACAATAT TTTCTTTCAC
CTCGAACAAA AGCTCGGCAC GGCGCTGACC TTCGTGAGCA AGGGTTCCTA TACGCGGACC
GAACAAACGC AGCAAGCCTG GACAACGGCG ACGCCGCTCT CGGCGACCAA CGGCACGTTG
TTCCACAACT TCGATTCGGT CTCCGATTTC TACAGTTGGA GCTTCCAGAA TTACCTGCGA
GCCAAGTTCG ATATCGGCGC TGCGAAAAAT ACGGTGATTG CGGGCTGGGA CGTTCTTCGC
TACAGCCAGC ATCAGTCTGA CACCACGACA TCGAAATTCA TTTCCATTCC AAATGTCTTC
GGCTCATTTA CGCTTCCGTC TCCCGACACC GGAAACGTGA TGCCGAATAA CACTACCTAC
TTCACTCAAA CCGGTTTATA TCTACAAGAT CAGTTTTCCT ATAAGAATTT CCATGCGCTC
GCGTCCGTGC GCCGGGATAC CTATCTGACA CATGCGACCT ACGCCGGTAA CCCACCAGCG
GGAAGCCATC AGAACGCCTA TAGCCCGAGC CTCGGCCTGC TCTACGAACT GACGTCCGAG
GTTGCCGTCT ACGCCAGCTA CAACCGTGGC TTCCAGCCGG GCCAGGCGCT TCAATTCGGT
GGCGGTGTGC TCCCTCCGCA AATCAGCCAG CAAGTCGAAG TGGGCATGAA GTTCAACCTG
CTGGACGACA AGCTGGCCAT CACGACCTCG GCCTACCGCA CCTCGTTCAG CAACTACAAC
GTCAACGATC CGCTCCATCG CGGTTTCTCT ATTCCCGTCG GCGGTGCCGT CAGCCGGGGA
TTCGAAGCAG AGATCAACGG CCAGCCGCTG CCCGGCGTCA ACGTGGTCGG CACCTACACG
TACAACGACT TCGTGCAGCC CCCGGCCGCC AAGATCGGGG TAAACCTGCC CAAGAACAGC
GCCAGCCTGT GGACGACCTA CAACTTCCAG ACCGAAAAGC TCCAGGGTTT CGGGGTTGGC
GCGGGGCTCT TCTTCGCGAG CGGGCAGTAC ATCGGCTCGG GCTCGGCGTA CCGCATCCCC
AGTCAGGTGG AGACGGATCT CGGCCTGTTC TATCGGAAGA AGGGGTACGG CTTGAATCTT
TCGATCAAGA ACGTGTTCAA CCGCAAGCTT TACTACAGCA GCACGTCGGC CGCCATGATT
CCGATGGGTC CGGAGCGGAC GGTCATGCTG ACCGGAACCT ATGACTTCTG A
 
Protein sequence
MKLNIRTRRA ISSQASGVAI AVAVAQVFIA ASAHAQQAAQ QSWHLASGPL DRTLVEIAQA 
ANVRLSYDAG LVQSLKSSPV EGSYTAEAAI RQALRGTGLD LVATGSGGLT IQKAVAKPAA
AVPLAASAAA ASVGPVDTTL PLISVAASRD SGGTGFVAES SSTYARSDVP LSQTPKSVSV
INAAVIQSQA AQSLSDVLRN ASGVVTRPGP LGVPTYTIRG FAASNLTSDG LATVGSAPNV
TPTIAISSVE VVKGPSAIVN GNSPPGGVIN LVKKTPQAEP FHEIQVGYGS YGSEQIALDS
TGAITADKKL RYRFIISGER VGQNSMGYDG ERNFYFAPTL EWKDSTTDLT VGYERTVNRE
PVPPFTVGYA KGDIYRNYID RPLGTPSDHF GAQTDNIFFH LEQKLGTALT FVSKGSYTRT
EQTQQAWTTA TPLSATNGTL FHNFDSVSDF YSWSFQNYLR AKFDIGAAKN TVIAGWDVLR
YSQHQSDTTT SKFISIPNVF GSFTLPSPDT GNVMPNNTTY FTQTGLYLQD QFSYKNFHAL
ASVRRDTYLT HATYAGNPPA GSHQNAYSPS LGLLYELTSE VAVYASYNRG FQPGQALQFG
GGVLPPQISQ QVEVGMKFNL LDDKLAITTS AYRTSFSNYN VNDPLHRGFS IPVGGAVSRG
FEAEINGQPL PGVNVVGTYT YNDFVQPPAA KIGVNLPKNS ASLWTTYNFQ TEKLQGFGVG
AGLFFASGQY IGSGSAYRIP SQVETDLGLF YRKKGYGLNL SIKNVFNRKL YYSSTSAAMI
PMGPERTVML TGTYDF