Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6087 |
Symbol | |
ID | 6125062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 72466 |
End bp | 75879 |
Gene Length | 3414 bp |
Protein Length | 1137 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641647106 |
Product | trehalose synthase |
Protein accession | YP_001773703 |
Protein GI | 170734589 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0830562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAAAC GCGAAGATTC CCTCGACGAC GTGCGCCGCG CGCAATTCCC GTCGCTCGCG CCGGCCGGCA CGCCGCGCCG GCGCCGCGCG CGCCGCCGCG AACCCGCGCT CTGTGCGGAC GATCCGCTGT GGTACAAGGA CGCGATCATC TACCAGGTGC ACGTGAAGTC GTTCTACGAC TCGAACAACG ACGGCATCGG CGATTTCCCC GGCCTGATCG CGAAGCTCGA CTACATCGCC GAACTCGGCG TCGACACGAT CTGGCTGCTG CCGTTCTATC CGTCGCCGCG CCGCGACGAC GGCTACGACA TCGCCGACTA CCGCGACGTG CATCCCGACT ACGGCACGCT GGCCGACGTG CGGCGCTTCA TCCGCGAGGC GCATGCGCGC GGCATCCGCG TGATCGCGGA GCTCGTGATC AACCACACGT CGGACCAGCA TCCGTGGTTC CAGCGCGCTC GCCGCGCGAA GCCGGGCTCC ACGCATCGCG ACTACTACGT GTGGTCCGAC ACCGACACGA AATACGCGGG CACGCGGATC ATCTTTCTGG ATACCGAAAC GTCGAACTGG ACCCACGACC CGGTGGCCGG CCAGTACTAC TGGCACCGCT TCTACTCGCA CCAGCCGGAC CTGAACTTCG ACAACCCGGC CGTCGTGCGC GAAGTGATCC AGGTGATGCG CTTCTGGCTC GACCTCGGCA TCGACGGGCT GCGGCTCGAC GCGGTGCCGT ATCTCGTCGA GCGCGAAGGT ACCAACAACG AGAACCTGCC CGAGACGCAT GCGATCCTGA AGCGGATTCG CGCGACGATC GACGCCGAGT ACCCGAACCG GATGCTGCTC GCGGAAGCGA ACCAGTGGCC GGAAGACGTG CAGGAATACT TCGGCAACGA GGACGAATGC CACATGGCGT TCCACTTCCC GCTGATGCCG CGCATCTACA TGTCGATCGC GAGCGAGGAT CGCTTCCCGA TCCTCGACAT CATGCGGCAG ACGCCGGCGC TCGCGCCGAG CAACCAGTGG GCCGTGTTCC TGCGCAACCA CGACGAGCTG ACGCTCGAGA TGGTCACCGA TTCGGAGCGC GACCTGCTGT GGCAGACCTA TGCGAGCGAC CGCCGCGCGC GGCTGAACCT CGGCATCCGG CGCCGGCTCG CGCCGCTGAT GGAGCGCGAC CGCCGACGCA TCGAGCTGAT CAATTCGCTG CTGCTGTCGA TGCCCGGCAC GCCGGTGATC TACTACGGCG ACGAACTCGG GATGGGCGAC AACATCCACC TCGGCGACCG CGACGGCGTG CGCACGCCGA TGCAGTGGTC GTCGGATCGC AACGGCGGCT TCTCGCGCGC CGACCCCGAA CTGCTGGTGC TGCCGCCGGT GATGGGCTCG CTGTACGGCT ACGACGCAAT CAACGTCGAG GCGCAGACGC GCGATCCGCA CTCGCTGCTG AACTGGACCC GCCGCATCCT CGCGACGCGC CGTGCGTCGC AGGCGTTCGG GCGCGGCACG ATCCGCTTCC TGCGCCCGGA GAACCGCAAG GTGCTCGCGT ACCTGCGCGA GCTGGACGGC CACGAGCCGG TGCTGTGCGT CGCGAACCTG TCGCGCGCGT CGCAGGCGGT CGAACTCGAC CTGTCCGAAT TCGCGGGCCG CGTGCCGATC GAGATGACCT CCGATTCGCC GTTTCCGCCG ATCGGCCAGC TCCCGTATCT CCTCACCTTC CCGCCGTACG GATTCCTGTG GTTCGTGCTC GCCGAGCATG GCCGCGAGCC GTCGTGGCGG CAGCCGCACG CGGAGCCGCT GCCCGAATAC GTGACGCTCG TGATGCGGCG CGGCGATACG CGGCCGGATG TCTCGCAACT GCACGCGCTG GCTCACGACG CGCTCGCGTC GTGGCTCGCG CGGCGGCGCT GGTTCGCATC GAAGGATCGC AAGATCGGCG ACGCGTGGCT GAACGTCGTC ACGCCGATTC CGGACGAGCC GTTCCAGTAT GCGGAGGCGT GGGTGTCCGC GAGCGACGGC GGCGTCGAGC GCTACGTGGT GCCGCTCGCG ACCGCGTGGG GCGGCGAGAC GTCCCATCCG CTGTTCGCGC AACTGGCGCT CGCGCGCGTG CGGCGCGGCC ATACGGTCGG CTACCTGACC GATGCGTTCG CGCTGCCGGC ATTCGCGCGC GGGATGCTGC GCAAGCTGCG CGACGGCGCG ACGGTGCCCA CGTCCGACGG CGGCCGGCTC ACCTTTCTGC CGGAAGACGC GCTCGCCGGG CTCGATCCGG GCGACGACGC GGAAGTGCGC TGGCTCGCGG CCGAGCAGAG CAACAGTTCG CTCGTGATCG GCGACGCGAT CGTGCTGAAG CTGGTGCGCA AGGTCGCGCA CGGCATTCAT CCGGAAGCGG AAATGAGCCG GCACCTGACG CGCATCGGCT ATGCGAACAC CGCGACGCTG GCCGGCGAAG TCGTGCACGT CGACCCGGAC GGCACGCCGC ATACGGTCGC GATCCTGCAG CGCTACGTCG ACAACCAGGG CGACGCGTGG ACGCGCTCGT TCGACTTCCT GCGGCGCGCG ATCGACGAAC TGGCGCTGCC CGCCGCGGAC GAAGGCGAGG CGGCCGAAAC GGACGAGGAA CCCGACGCGC TGCTCGGCTA CGCGGCGTTC GCGGGCATCA TCGGCACGCG GCTCGGCCAG TTGCACGTCG CGCTCGCGCA GCCGTCCGAC GATCCCGCGT TCGCGCCGGA GCCCGCGACG CCCGAGCACG TCGACGGCTG GTGCGTGGAC GCGATCGCGT CGTTCGAACG CGCGCTCGAC GTGCTGGGCA CGCGGCTCGA CGCGCTCGAT CCGGCCACCC GCGCGTCGGC CGACGCGCTG CTCGCGTCGC GCGACGCGGC CGTCGAGGCG CTCGGCGAAC TGGTGCCACG CACGCTCGAC GCGCAATGCA CGCGGATTCA CGGCGATTTT CATCTGGGCC AGGTGCTCGA CGTGCAGGGC GACGCGCTGC TGATCGACTT CGAAGGCGAA CCGGCGCGCC CGCTCGAGCG GCGTCGCGCG AAATCGCATC CGCTGCGCGA CGTGGCCGGC CTGCTGCGCT CGCTGTCCTA TGTCAGCGCG ACCGCGCAGT TCGCGATCGA GAAGGCGCCG CCGCAAGCGG CCGGCCGCAA GCGTGCGCTG TTCGACCGCT TCGGGCAGGC CGCGGCCGAT CGCTTCGTCG AATGCTATCG CGCGGCGGCC GACCTCGCGC CCGCGCGCTT CGTCGATCCG CACTACGCGG ATCGCCTGCT CGCGCTGTTC CTGATCGACA AGGCGTCGTA CGAGCTGTGC TACGAAGCCG CGAACCGGCC CGACTGGCTG AGCGTGCCGG TCGGCGGGCT CGCGGCGCTG GTCGACCGGC TGCTCGGCGA CGGCGTGCTG CCGGACGACG GAGGAAATCC ATGA
|
Protein sequence | MMKREDSLDD VRRAQFPSLA PAGTPRRRRA RRREPALCAD DPLWYKDAII YQVHVKSFYD SNNDGIGDFP GLIAKLDYIA ELGVDTIWLL PFYPSPRRDD GYDIADYRDV HPDYGTLADV RRFIREAHAR GIRVIAELVI NHTSDQHPWF QRARRAKPGS THRDYYVWSD TDTKYAGTRI IFLDTETSNW THDPVAGQYY WHRFYSHQPD LNFDNPAVVR EVIQVMRFWL DLGIDGLRLD AVPYLVEREG TNNENLPETH AILKRIRATI DAEYPNRMLL AEANQWPEDV QEYFGNEDEC HMAFHFPLMP RIYMSIASED RFPILDIMRQ TPALAPSNQW AVFLRNHDEL TLEMVTDSER DLLWQTYASD RRARLNLGIR RRLAPLMERD RRRIELINSL LLSMPGTPVI YYGDELGMGD NIHLGDRDGV RTPMQWSSDR NGGFSRADPE LLVLPPVMGS LYGYDAINVE AQTRDPHSLL NWTRRILATR RASQAFGRGT IRFLRPENRK VLAYLRELDG HEPVLCVANL SRASQAVELD LSEFAGRVPI EMTSDSPFPP IGQLPYLLTF PPYGFLWFVL AEHGREPSWR QPHAEPLPEY VTLVMRRGDT RPDVSQLHAL AHDALASWLA RRRWFASKDR KIGDAWLNVV TPIPDEPFQY AEAWVSASDG GVERYVVPLA TAWGGETSHP LFAQLALARV RRGHTVGYLT DAFALPAFAR GMLRKLRDGA TVPTSDGGRL TFLPEDALAG LDPGDDAEVR WLAAEQSNSS LVIGDAIVLK LVRKVAHGIH PEAEMSRHLT RIGYANTATL AGEVVHVDPD GTPHTVAILQ RYVDNQGDAW TRSFDFLRRA IDELALPAAD EGEAAETDEE PDALLGYAAF AGIIGTRLGQ LHVALAQPSD DPAFAPEPAT PEHVDGWCVD AIASFERALD VLGTRLDALD PATRASADAL LASRDAAVEA LGELVPRTLD AQCTRIHGDF HLGQVLDVQG DALLIDFEGE PARPLERRRA KSHPLRDVAG LLRSLSYVSA TAQFAIEKAP PQAAGRKRAL FDRFGQAAAD RFVECYRAAA DLAPARFVDP HYADRLLALF LIDKASYELC YEAANRPDWL SVPVGGLAAL VDRLLGDGVL PDDGGNP
|
| |