| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6086 |
|---|
| Symbol | |
|---|
| ID | 6125061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 70259 |
|---|
| End bp | 72469 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641647105 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_001773702 |
|---|
| Protein GI | 170734588 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.133555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA CGCTGTTCGA CCGCGCCGAT ATCGATGCGC TGCTCGCCGG CCGCCATCCC
GACCCGTTCG CGTGCCTCGG CCCGCACGAA CAGGACGACC AGATCGTCGT GCGCGCGCTG
CTGCCCGGCG CCGAGCGCGT GCGCGCGCTG TCGCCGGACG GCGCCGAACT CGGCACGCTC
GCCTGCGTCG ATCGCGCCGG CTGCTTCGCG GGAACGATCG CGCACGATGG CGGCGCGCCG
CACTATCTGC TCTCGATCGA CTGGCCGGAT GCGCATCAGG TGACCGACGA TGCGTACGCG
TTCGGCACGC TGCTCGACGA AGCAGCGCTT GCGCGTTTTT CGGCCGGCGA CCCCGAAGCC
GTGCTCGACT GCCTCGGCGC GACACCGGTG CGCATCGACG ACACCGACGG CGTGCGTTTC
GCGGTGTGGG CGCCGAATGC GCAGCGCGTA TCGGTGGTCG GCGATTTCAA CGCATGGGAC
GGCCGCCGCC ATCCGATGCG GCTGCGGCGG CCGTCGGGCG TGTGGGAGCT GTTCGTGCCG
GGTATCGGCG CGGGCGAGCG CTACAAATTC GAGCTGTGCG CGGCCGACGG GCGTGTGCTG
CCGCACAAGG CCGATCCGTG CGCGCGGGCG ACCGAGGCGC CGCCGCGCAC GGCGTCGGTG
GTCGCCGACG TCGCTGCGCT CCACGCGTTC GCCTGGCACG ACGACGGCTG GATGCGCGCG
CGGCCGCGCC ACGACGACCG CTATCGCGTG CCGTGGTCGA TCTACGAGGT CCATCCGGAG
TCGTGGCAGC GCATCCCCGA ACAGATGGAC CGCAGCGCGA CGTGGGACGA ACTCGCCGAG
CGGCTGATTC CGTACGTGAA GGGGATGGGC TTCACGCACG TCGAATTCAT GCCGATCGCC
GAATACCCGT TCGGCGGCTC GTGGGGCTAC CAGCCGCTCG CGCAGTTCGC GCCGTCCGCG
CGCTTCGGGC CGGTCGACGG CTTCGCGCGC TTCGTCGATC GCGCGCACGC GGCCGGTATC
GGCGTGCTCG TCGACTGGGT GCCCGCGCAT TTTCCGAACG ACGCGCACGG GCTCGCGCAA
TTCGACGGCA GCGCGCTGTA CGAGCATGCC GATCCCCGCG AGGGGATGCA CCCCGACTGG
AACACCTGCG TGTTCAACGT CGGGCGCAAC GAGGTCAGTG CGTTCCTCGT CGCGTCGGCG
CTCGCGTGGG CGCGCCGCTA TCACGTCGAC GGCATCCGCG TCGACGCGGT CGCGTCGATG
CTGTATCGCG ACTATTCGCG CAAGGAAGGC GAATGGGTGC CGAACGTGTA CGGCGGCCGC
GAAAACCTCG AATCGGTCGC GTTCCTGCGC CGGCTGAACG ACACGCTGCA CGGTGACGTC
GCGCCGGCCG GCGTCGTCAC CGTCGCGGAG GAATCGACCG CGTGGCCGGG CGTCACCGCG
CCGACCGCCG ACGGCGGGCT CGGCTTCGAC TTCAAGTGGA ACATGGGCTG GATGCACGAC
ACGCTCGCGT ACCTGCACGA AGACCCGATC CACCGCCGCT ATCACCACGA CCGGATGACG
TTCGGGCTCG TGTACGCGTT CTCCGAGCGC TTCGTGCTGC CGCTGTCGCA CGACGAGGTC
GTGCACGGCA AGGGCTCGCT CGTCGCGAAG ATGCCCGGCG ACGCGTGGCA GCGGCTCGCG
ACGCTGCGCG CGTATTTCGG CTTCATGTGG GCACACCCCG GCAAGAAGCT GCTGTTCATG
GGCAGCGAAT TCGCGCAGTG GAGCGAGTTC GCGCACGACG CGACGCCGCA CTGGGATTTG
CTCGACGCGC CCGCGCATCG CGGCGTGCAG CGGCTCGTGC GCGACCTCAA CCGCGCGTAT
GCGGCCGAGC CGGCGCTGCA TGCGCTCGAC TGCCACGCGG CCGGCTTCTC CTGGCTGATC
GGCGACGACC GCGACAACAG CGTGTTCGCG TTCGCGCGCC GCGACGATAC GGGGCGCCTG
GTCGTCGCCG TCTGCAACTT CACGCCCGTG CCGCGCGCCG GTTACCGGCT CGGCCTGCCC
GCGCCCGGCC ACTGGCGCGA ACTGATGAAC ACCGATGCCG CGTCGTACGG CGGCACCAAC
GCCGGCAACG ACGGCGCCGT GTGGGCCGAA GCCGTGCCCG CGCACGGCGA GGCGTGGTCG
GCGAGCCTGC GCCTGCCGCC GCTCGCGACG CTCTGGTTGA CCCCTGCCTG A
|
|---|
| Protein sequence | MTDTLFDRAD IDALLAGRHP DPFACLGPHE QDDQIVVRAL LPGAERVRAL SPDGAELGTL
ACVDRAGCFA GTIAHDGGAP HYLLSIDWPD AHQVTDDAYA FGTLLDEAAL ARFSAGDPEA
VLDCLGATPV RIDDTDGVRF AVWAPNAQRV SVVGDFNAWD GRRHPMRLRR PSGVWELFVP
GIGAGERYKF ELCAADGRVL PHKADPCARA TEAPPRTASV VADVAALHAF AWHDDGWMRA
RPRHDDRYRV PWSIYEVHPE SWQRIPEQMD RSATWDELAE RLIPYVKGMG FTHVEFMPIA
EYPFGGSWGY QPLAQFAPSA RFGPVDGFAR FVDRAHAAGI GVLVDWVPAH FPNDAHGLAQ
FDGSALYEHA DPREGMHPDW NTCVFNVGRN EVSAFLVASA LAWARRYHVD GIRVDAVASM
LYRDYSRKEG EWVPNVYGGR ENLESVAFLR RLNDTLHGDV APAGVVTVAE ESTAWPGVTA
PTADGGLGFD FKWNMGWMHD TLAYLHEDPI HRRYHHDRMT FGLVYAFSER FVLPLSHDEV
VHGKGSLVAK MPGDAWQRLA TLRAYFGFMW AHPGKKLLFM GSEFAQWSEF AHDATPHWDL
LDAPAHRGVQ RLVRDLNRAY AAEPALHALD CHAAGFSWLI GDDRDNSVFA FARRDDTGRL
VVAVCNFTPV PRAGYRLGLP APGHWRELMN TDAASYGGTN AGNDGAVWAE AVPAHGEAWS
ASLRLPPLAT LWLTPA
|
|---|
| |