| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6085 |
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| Symbol | |
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| ID | 6125060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 68109 |
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| End bp | 70226 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641647104 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001773701 |
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| Protein GI | 170734587 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0291933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG CCCTGCCCGA CCGTCTCGAA CCCGGCCGCA GCTATCCGCT CGGCGCCAGT
TGGGACGGCC TCGGGACCAA CTTCGCGGTG TTTTCCGCGC ATGCGCAGCG CATCCAGCTG
TGCGTGTTCG ACCCGACCGG CCGCAAGGAA CTCGCGCGCC TCGACCTGCC CGAATGCACC
GACGAGGTGT GGCACGGCTA CCTGCCCAAC GCGCATCCGG GCACCGTGTA CGGGTTCCGC
GCGGACGGCC CGTACCAGCC GCAGCACGGC CATCGCTTCA ATCCGACCAA GCTGCTGCTC
GACCCGTACG CGCGCAAGCT GGTCGGCCAG TTCCGCTGGT CGGACGCGCT GTTCGGCTAT
CGCGTGCATT CGAACCGGGC CGACCTGTCG ATGGACCGCC GCGATTCGGC GCCCGCGATG
CCGAAAGCGG TGGTCGTCGA CGAAGCGTTC GACTGGAGCA TGGACCGCCG CCCGAACGTG
CCGTGGCGCA GCACCGTGAT CTACGAGACC CACGTGCGCG GCGCGTCGAT GCGCCGCGCC
GGGCTGCGCC CGCCGGAGCG CGGCACGTTC GCGTCGCTCG CGCATCCGGC GTTCATCGAT
CACCTGTTGT CGATCGGCGT GACGACGGTC GAGCTGCTGC CGATCCACGC GTTCCTGCAG
CAGCGCGAGC TCGTGAACCG CGGGCTGCGC AACTACTGGG GCTACGACAC GGCCGCGTTC
TTCGCGCCGG AGCCGTCGTA CCTGACGACG CGGCGGCTCG ACGAAATGCG CATCGCGGTG
CGCCAGTTGC ATGCGGCCGG CATCGAGGTC GTGCTCGACG TGGTCTACAA CCATACGTGC
GAAGGCAACC AGCTCGGGCC CACGCTGTCG TGGCGCGGCC TCGACAACGC GAGCTATTAC
CGGCTGCGGC CCGACGATCC GCGTTACCAC GTCGACGAAA CCGGCTGCGG CAACACGCTG
AACATGTCGC ATCCGCGCGT CGTGCAGATG GTGATGGATT CGCTGCGCTA CTGGGCGACC
GCATTCAACA TCGACGGCTT CCGCTTCGAT CTCGGCGTGA CGCTCGGCCG CGAGGATCAC
GGCTTCGAAC CGGGCGCCGG GTTCTTCGAT GCGCTGCGGC AGGACCCCGT GCTCGCGCAG
CGCAAGCTGA TCACCGAGCC GTGGGATCTC GGCCCCGGCG GCTATCAGCT CGGCCGCCAC
CCGCCCGGCT TCGCCGAATG GAACGACCGG TTTCGCGACA CCGTGCGGCG CTTCTGGCGC
GGCGACGCGG GGCAGCGCCC GGAACTGGCC GCACGCCTGT CGGGCTCGGC CGACCTGTTC
AATCACGGCC GGCGCCGCAC GTGGGCCTCG ATCAATTTCG TGACCGCGCA CGACGGCTTC
ACGCTGGCCG ACCTCGTGTC GTATGCGGGC AAGCACAACG ACGCGAACGG CGAGGACAAC
CGCGACGGCC GCGACGACAA CTGCAGCGCG AACTGGGGCG TCGAAGGGCC GACCGACGAC
GCGGCGATCC GCGAGGTGCG CCTGCGCGTC GCGCGCTCGA TGCTCGCGAC GCTGTTTACC
GCGCTCGGCA CGCCGATGCT CGTGGCCGGC GACGAATTCG GCCGCACGCA GCACGGCAAC
AACAACGCGT ATTGCCAGGA TAACGAACTG TCGTGGCTCG ACTGGGACCT GGCGCACAGC
GACGACGGCG TGCAGATGAC CCGCTTCGTG TCGCGGCTCG CCGCGCTGCG GCGCATGTAC
CCGGTGATGT CGGCGCCGCG CTACCCGTCA GGCGACCGCG ACGGCGCGCC GGGCATGCGC
GAGATCGACT GGTTCGACGA ACGCGGCGAC GTGCTCACCG TGCCCGCGTG GGAAGACGGC
GAACGCCGCG CATTGACGAT GCGGCGCGTC GGCACCGGCC GCACCGGGCG CACCGAGGCG
TTGCTCGTGA TGCTGAACGC ATCGGCCGAC ACCATCACGT TCATGCCGCC CGCGCCCGTG
CTCGATTACC GCATCCTGCT CGACACCGCG ACACCCGACT CAGGGCCGCG CTCGTGGCCG
GAAGCGGGGC TCGACGTGGC CGCGCATGCG GCCGTGATCG CGGTCGCGGC CGTGCCGCCG
CCCGATCAGT CTTCCTGA
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| Protein sequence | MPTALPDRLE PGRSYPLGAS WDGLGTNFAV FSAHAQRIQL CVFDPTGRKE LARLDLPECT
DEVWHGYLPN AHPGTVYGFR ADGPYQPQHG HRFNPTKLLL DPYARKLVGQ FRWSDALFGY
RVHSNRADLS MDRRDSAPAM PKAVVVDEAF DWSMDRRPNV PWRSTVIYET HVRGASMRRA
GLRPPERGTF ASLAHPAFID HLLSIGVTTV ELLPIHAFLQ QRELVNRGLR NYWGYDTAAF
FAPEPSYLTT RRLDEMRIAV RQLHAAGIEV VLDVVYNHTC EGNQLGPTLS WRGLDNASYY
RLRPDDPRYH VDETGCGNTL NMSHPRVVQM VMDSLRYWAT AFNIDGFRFD LGVTLGREDH
GFEPGAGFFD ALRQDPVLAQ RKLITEPWDL GPGGYQLGRH PPGFAEWNDR FRDTVRRFWR
GDAGQRPELA ARLSGSADLF NHGRRRTWAS INFVTAHDGF TLADLVSYAG KHNDANGEDN
RDGRDDNCSA NWGVEGPTDD AAIREVRLRV ARSMLATLFT ALGTPMLVAG DEFGRTQHGN
NNAYCQDNEL SWLDWDLAHS DDGVQMTRFV SRLAALRRMY PVMSAPRYPS GDRDGAPGMR
EIDWFDERGD VLTVPAWEDG ERRALTMRRV GTGRTGRTEA LLVMLNASAD TITFMPPAPV
LDYRILLDTA TPDSGPRSWP EAGLDVAAHA AVIAVAAVPP PDQSS
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