| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6067 |
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| Symbol | |
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| ID | 6125042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 46523 |
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| End bp | 47956 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641647086 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_001773683 |
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| Protein GI | 170734569 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.166835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0599686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCT CGCTTGCGCT GCAGATGCGA CAGCATCTCG CACTTACGCC GAGGCTTCAG
CAGTCGCTGC GGCTGCTGCA GTTGTCCTCG CTGGAGTTTC AACAGGAATT GCGTCAGGCG
CTCGACATGA ACCCGTTTCT CGAAGACGGC CAGGGCGACG AGGACACCGC CGCCGGCACG
CCCGAGCAGC CGACCGAAGC GGCCGCGCCC GAAGCGGCGC CCGAGCACGA CGACATTCGC
CCGCCGGATG GCGAGGTGCC GTTTACCGCG GCGCCCGCGC CGCGCGGCAC GAGCCGTCAG
GGCGACGACA CCGACGGCCT GTCGCCCGGC GAATGGATCG CCGCCGAGCC GTCGCTGCAT
CAGCAACTGC ACGATGCGCT GCGGCTCTAT CCGCTCAACA AGCGCGACCG CGAGGCCGCG
CGCCTCGTGA TCGATGCGCT GGACGACGAC GGCTACCTGC GTCAGGAACT GCCTGAACTG
CTGGTCGCGG CCGATCCCGC ATGGCTGCTG TCGGAGCAGG ATCTCTCGGT CGCGCTGCGG
CTCGTGCAGA TGCTCGACCG GCCGGGTATC GCGGCCCGTT CGTTGTCCGA ATGCCTGGTC
TTGCAGCTCG ACGCGATTCC GGCCGGCACG CCGGCGCTCG CGGAAGCGAA GGCGATCGCG
CGCGAGCATC TGGAGCGGCT CGCGCGCCGC GAGACGGCCG AGATCCAGCG GCGTCTCGGC
TGCAACCAGC AGACGCTGCA CGCGGCCTGC GCGCTGGTGC GCGGGCTCGA CCCGCGCCCC
GGCAATCACT ACGGCAGCAC GCGCGGCGAC TACGTGGTGC CCGACGTGAT CGTGCGCCAG
GTGCGCGACG AATGGATCGT CACGATCAAC CCGGCCGTGC TGCCGCGCGC CCGGCTGCAC
GAGCGCTATG CGACGCTGTT CGCGCAGTCG AGCGGCGAGC GCGATTCGCC GCTCGGCCAG
CAGTTGCAGG AAGCGCGCTG GCTGATCCGC AACGTGCAGA AGCGTTTCGA CACGATCCAG
CGCGTGGGCG AATGCATTGT CGCGCGGCAG CGCGATTTCT TCCGCTACGG CGAGATCGCG
ATGAAGCCGC TGGTGCTGCG CGACATCGCG GAAGAGCTCG ACCTGCACGA ATCGACGGTC
TCGCGCGCGA CCGGCAACAA GTACATGGCC ACGCCGCACG GCACGTTCGA GTTCAAGCAT
TTCTTCCCGC GCAAGCTCGA GGCGGCCGGC AAGGGCGTGT GTTCGGCGTC GGCCGCGAAG
GTGCTGATCC GCGACATGAT CGCGGCCGAG CGGCAGACCG ATCCGCTGTC CGACGTCGCG
CTCGCGGAAA ACCTCGCGGG CCGCGGCATC CTTCTTGCGC GCCGCACGGT GACCAAGTAT
CGCCAGGCGA TGAAGATTCC GCCGGCCGAC CTGCGGCGCC GCGACGCCGC GTGA
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| Protein sequence | MPVSLALQMR QHLALTPRLQ QSLRLLQLSS LEFQQELRQA LDMNPFLEDG QGDEDTAAGT
PEQPTEAAAP EAAPEHDDIR PPDGEVPFTA APAPRGTSRQ GDDTDGLSPG EWIAAEPSLH
QQLHDALRLY PLNKRDREAA RLVIDALDDD GYLRQELPEL LVAADPAWLL SEQDLSVALR
LVQMLDRPGI AARSLSECLV LQLDAIPAGT PALAEAKAIA REHLERLARR ETAEIQRRLG
CNQQTLHAAC ALVRGLDPRP GNHYGSTRGD YVVPDVIVRQ VRDEWIVTIN PAVLPRARLH
ERYATLFAQS SGERDSPLGQ QLQEARWLIR NVQKRFDTIQ RVGECIVARQ RDFFRYGEIA
MKPLVLRDIA EELDLHESTV SRATGNKYMA TPHGTFEFKH FFPRKLEAAG KGVCSASAAK
VLIRDMIAAE RQTDPLSDVA LAENLAGRGI LLARRTVTKY RQAMKIPPAD LRRRDAA
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