| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6053 |
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| Symbol | |
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| ID | 6125028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 37675 |
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| End bp | 38532 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641647072 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001773669 |
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| Protein GI | 170734555 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0516293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CACAGACTCC CCCGCCGCAG AAACAGACGC AGCAGCCGGG CACGGAGCGC
GACATGCATC CGAAACCGCG CGACGAGGCG GCCGACTACG TCGGCAGCGG CAAGCTCGCC
GGCAAGGTCG CGCTGGTGAC GGGCGGCGAC AGCGGGATCG GCCGCGCCGT GGCGGTCGGT
TTCGCGAAGG AGGGCGCGGA CGTCTCGATC GTCTACCTGA AGGAATCCGA CGACGCCGCG
CACACGAAGC AACTGATCGA GCAGGCCGGC CGGCGCTGCG AGGCGATCGC GTGCGATGTC
GGCGATCGCC GGCAGGCGCG CGACGCGGTC GCCCGCACGG TCGAGCGGCT CGGCCGGCTC
GACGTGCTCG TGAACAACGC GGGCGAGCAG CATCCGCAGC CGGGCATCGA GGACGTGTCC
GAGGAACAGC TCGAACGCAC GTTCCGCACC AACGTATACG GGATGTTCTT CTGCACGCAG
GCCGCGCTGC CGCACATGAA GGAAGGCGGC CGCATCGTCA ACACGGCGTC GGTCACTGCT
TATCACGGCA GCCCGAAACT GCCCGACTAC TCGGCGACCA AGGGCGCGAT CGTCGCGTTC
ACGCGCTCGC TGTCGATCGA GCTGGCCGAA CGCGACATCC GCGTGAACGC GGTCGCGCCG
GGGCCGATCT GGACGCCGTT GATTCCGTCG ACGTTCACGC CCGAGCAGGT CGCGAAATTC
GGCTCCAACG TGCCGCTCAA GCGGCCGGGC CAGCCGGACG AACTGATCGA CTGCTACGTG
TTGCTCGCGT CGGACGGCGC GAGCTACATG ACCGGGCAGA CGCTGCATCC GAACGGCGGC
TCGATCGTCG GCGGCTGA
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| Protein sequence | MTTAQTPPPQ KQTQQPGTER DMHPKPRDEA ADYVGSGKLA GKVALVTGGD SGIGRAVAVG
FAKEGADVSI VYLKESDDAA HTKQLIEQAG RRCEAIACDV GDRRQARDAV ARTVERLGRL
DVLVNNAGEQ HPQPGIEDVS EEQLERTFRT NVYGMFFCTQ AALPHMKEGG RIVNTASVTA
YHGSPKLPDY SATKGAIVAF TRSLSIELAE RDIRVNAVAP GPIWTPLIPS TFTPEQVAKF
GSNVPLKRPG QPDELIDCYV LLASDGASYM TGQTLHPNGG SIVGG
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