Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6039 |
Symbol | |
ID | 6125014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 22502 |
End bp | 23554 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641647058 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001773655 |
Protein GI | 170734541 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.767998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.985629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTTG TCTATCGCTA CCGGGTGAAA TCGCTCAATG GACTGCTCAA CAAGCAGAGC CGTGCGGTGA ACTACGTCTG GAACTTCTGC AATGACACGC AGAAGCACGC GCTGAAGTGG AACAAGAAGT GGCCGACCGG ATTCGACCTG AACGTGCTGA CGACCGGCAG CAGCAAGGAA CTCGGGATCC ATTCCGGCAC GGTCAACGCG ACGTGCGAGC AATACGCGAA GTCGCGCAGT CAGCACCGTC GGCCCTACCT GCGCTATCGC GGCAGGAAAT CGTTGGGCTG GGTGCCGCTG AAGGGGCGTG ACCTGAAGCG CGAGGGTGAC GCGTTCCGTT TCGCCGGCAA CACGTTTCGC GTGTTCAACA GCCGACCGCT TCCCGAAGAC AAGATCAAGG ATGGAACCAA CTTCGCGCAG GATGCGCGCG GCAACTGGTT CTTGAACATC GTGATCGAGA TGCCAGATGT TCAGGCTCGT CCGATCCGTT CCGGTGTCGG CATCGATCTC GGCCTGAAAG ACTTCGCCAC ACTTTCGACC GGCGAGAAGC TGCCCAATGA CCGGTTCGGT CGACGAGCGG CCGAGAAGCT GGCGAAAGCG CAACGGGCGC GCAAGCACAA GCGGCATATC GCGAAGCTGC ACGCCAAGAT CGCGAATGCG CGTGCCGATT TCCAGCACAA GCTCGCGCTC GATCTGGTGC GGCGCTTCGA TTACATCGCG GTCGGCAACG TGTCGGCCGC GAAACTCGCC AGAACCAGGA TGGCGAAGAG CGCCTACGAC GCGTCCTGGT CGTCCTTCCG GAACAAGCTC CGTTACAAAG CGATCGCGCA CGGAGCCACG TTCGAGGAAG TGGACGAAAG CGGTTCGACC CAGTCCTGTT CGTCGTGCGG GTCGAAAGAC AGCACGACGC GGCCGAAAGG TATCGCGGGA CTGCGAATAA GAGAGTGGGC CTGTAGTGAC TGTGGTGTCG AGCATGATCG AGATACCAAC ACTGCTGTGA ATATTCTCCG ATGCGGACGT GCATCGCCAG GTGTGGGAAT CATTTCCCTT TAG
|
Protein sequence | MILVYRYRVK SLNGLLNKQS RAVNYVWNFC NDTQKHALKW NKKWPTGFDL NVLTTGSSKE LGIHSGTVNA TCEQYAKSRS QHRRPYLRYR GRKSLGWVPL KGRDLKREGD AFRFAGNTFR VFNSRPLPED KIKDGTNFAQ DARGNWFLNI VIEMPDVQAR PIRSGVGIDL GLKDFATLST GEKLPNDRFG RRAAEKLAKA QRARKHKRHI AKLHAKIANA RADFQHKLAL DLVRRFDYIA VGNVSAAKLA RTRMAKSAYD ASWSSFRNKL RYKAIAHGAT FEEVDESGST QSCSSCGSKD STTRPKGIAG LRIREWACSD CGVEHDRDTN TAVNILRCGR ASPGVGIISL
|
| |