| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6955 |
|---|
| Symbol | |
|---|
| ID | 6132675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7651745 |
|---|
| End bp | 7652743 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641647025 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001773622 |
|---|
| Protein GI | 170744967 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0416972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTACG CGCACAAGCC CCTCGACCAG CAGGTAATCG TGATCACGGG AGCGTCGAGC
GGGATCGGCC TCGCCACGGC GCGCCGGGCG GCGCGCAGCG GCGCCCGGGT GGTGATGGGC
GCCCGCAACG CCGAGGCGCT CGCGATGATC CAGGACGAGA TCGGGCACGA CGGCGGGCAG
GCGGCCCACG CGGTCGGCGA TGTCGGCCGG CGCGAGGACG TGCAGGCCCT GGCCGATACG
GCGATGCAGC GCTTCGGCCG CATCGACAGC TGGGTGAACG ACGCCGGCAT CTCGATCTTC
GGGCGGCTGG AGGAGGTCAG CGACGCGGAC AGCGACCGGC TGTTCCGGAC GAATTTCTGG
GGCACCGTCT ACGGCTCGCT GGTGGCGCTC CCCTACCTGC GGCAGCAGGG CGGCGCGCTG
ATCAATGTCG GCAGCATCGC CTCCGACATG GTGATCCCGC TCCAGGCCAT GTACTCGGCG
AGCAAGCACG CGGTGCGGGG CTTCACGGAC GGGCTGCGGG CGGAGCTGGA CATGGAGGGG
GCGCCGGTCT CGGTGACGCT GATCAAGCCC GGCTCGATCG ACACGCCCCT GACCCACCAC
GCCCGCAACT ACATGGACCG CGAGCCGCAG CTGCCCCCGC CGGTCTACCA CCCGGACGAG
GTGGCGCGGG CCATCCTGCA CGCCGCGGTG CATCCCCAGC GGGAGATCTA CGTCGGCGGC
GGCGGCCGCG CGATGACCGG CCTCAAGAAG GTGGCGCCCC GCGCCTTCGA GCGCCTCGGC
GCCGTGATGT CCCAGGCCCA GCGCGGCGCC GAGCCGCCGC GCGACCCGCG CGGGTCCCTG
CACGAGCCGG GCATCGACGG GCAGGTCCAG GGCGGCCACC CGGGCTACGT GCGGCGCACC
AGCACCTACA CGCGGGCGCA GCTCCACCCG CTGACCACCG GGGCGGTGAT GGCCGGGGTC
GGGCTCGCGG CGGCGGCGCT GATGAAGCGG CGGGCGTGA
|
|---|
| Protein sequence | MVYAHKPLDQ QVIVITGASS GIGLATARRA ARSGARVVMG ARNAEALAMI QDEIGHDGGQ
AAHAVGDVGR REDVQALADT AMQRFGRIDS WVNDAGISIF GRLEEVSDAD SDRLFRTNFW
GTVYGSLVAL PYLRQQGGAL INVGSIASDM VIPLQAMYSA SKHAVRGFTD GLRAELDMEG
APVSVTLIKP GSIDTPLTHH ARNYMDREPQ LPPPVYHPDE VARAILHAAV HPQREIYVGG
GGRAMTGLKK VAPRAFERLG AVMSQAQRGA EPPRDPRGSL HEPGIDGQVQ GGHPGYVRRT
STYTRAQLHP LTTGAVMAGV GLAAAALMKR RA
|
|---|
| |