Gene M446_6886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6886 
Symbol 
ID6134326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7578977 
End bp7579660 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID641646963 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001773560 
Protein GI170744905 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCT ATCTCTTCGG CGAAGCGGAT GCCGCTTCGC CCAATCCTCC CGATTTGCCG 
CCATTCCTGC GTGACCATCT CGGTAAGCAG TTGCGTGCCG GCTACGCCGC GGTTGTGACC
GGGCGGCAGC CTCAAGCGCT GCTCGACTTG GTCGCCCGGC TCGAGGACGC GCTGGCTAAA
GTGGCGGCAA CGAGGTCCTC GTTCGGCAAC GACGTTCTGG CCCAGGTGCC TGCTCTGCGG
CGTTTCGCGC TCACCCTCAC CATCGACGCC ACTCAGGCCG ACGACCTCGT CCAAGAGACC
CTGCTGCGCG CGTGGCAACA CCAGCGCCGC TTCCAGGCGG GCACCTGCCT CCGGGCATGG
CTGTTCACCA TTCTGCGCAA CCAGTTCTAC ACGACCTGCC GCAAGCGGCG CTGCGAGGTC
GAAGATGCTG ACGGTATGGC CGCGCAGAAG CTGGTCGCTC TGGCCGAGCA GGAGAGTGGG
ATCGAGCTGC GGGAGACCTG GGAGCAACTC GACAAGCTGC CCGCGTCGCA GCGCGAAGCC
CTGCTGCTCA TCGCCGTCCA GGGGCTCTCC TACGAGGCGG CCGCACGCCT GATGGGCTGC
CGTGTCGGCA CCGCGAAGAG CCGCGTCAAT CGCGCCCGGA TAGCCCTGGC TGAAGCGCTG
GGCTACGAGC GCGCGCATTC ATGA
 
Protein sequence
MSFYLFGEAD AASPNPPDLP PFLRDHLGKQ LRAGYAAVVT GRQPQALLDL VARLEDALAK 
VAATRSSFGN DVLAQVPALR RFALTLTIDA TQADDLVQET LLRAWQHQRR FQAGTCLRAW
LFTILRNQFY TTCRKRRCEV EDADGMAAQK LVALAEQESG IELRETWEQL DKLPASQREA
LLLIAVQGLS YEAAARLMGC RVGTAKSRVN RARIALAEAL GYERAHS