| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6826 |
|---|
| Symbol | |
|---|
| ID | 6135336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 7523528 |
|---|
| End bp | 7525801 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641646907 |
|---|
| Product | AAA family ATPase, CDC48 subfamily protein |
|---|
| Protein accession | YP_001773505 |
|---|
| Protein GI | 170744850 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG ACACGGGCAG CGTGCGCGCG CAGGTGGCGA ATGCGCGGGC GCAGGATGTG
GGGCGCGGTG TCGCCCGGGT GGGCGCGGCG GTTCTCCGCA GCCTGCACCT GCAGGAGGGC
GACCCGATCG AGATCGTCGG CAAGCGCCAC ACCACGGCGC TCGCCATCGC CCTCGGCGCC
GAGGACGAGG GCCTCAGCAT CATCCGCCTC GACGGCCTCC AGCGCGTCAA TGCGGGGGTG
AGCTCGGGCG ACCACGTCGA GATCAAGCGC GCCGAGGTGC GGCCCGCGAA CCGCGTCGTG
CTCGCCCCGG CCCAGAAGAA CCTGCGCCTG CAGGGCTCGG CCGAGGCCCT GCGCCGCACC
TTCTTCCGGC GGCCGCTGAT GGCCGGGGAC GTGATCTCGA CCTCGGTGCA GTCGCGGATG
GGCCACGACG ACGTGCCGCC CGAGCTGCGC TCGATGTTCA ACCTGCCGGC CTACGGCCTT
CAGGAGATCC GCCTGGTCGT GGTCTCGACC CAGCCGCGCG GCATCGTGCA GGTCACGGCC
GAGACCGAGA TCGACCTGCG GCCGATCTAC GAGGAGCCCA AGGAGGCGCG GCGCGCCGAC
GTCACCTACG ACGACATCGG CGGGCTCGGC AGCACCGTCG ACCAGGTGCG CGAGATGGTG
GAGCTGCCGC TGCGCCACCC CGAGCTGTTT CAGCGTCTCG GCATCGACCC GCCCAAGGGC
GTGCTCCTCT ACGGCCCGCC CGGCACCGGC AAGACCCTGC TCGCCCGCGC GGTCGCCAAC
GAGACCGAGG CGCAGTTCTT CCACATCGCC GGCCCGGAGA TCATGGGCAG CCAGTACGGG
GAATCCGAGC AGCGCCTGCG CCAGATCTTC TCCGACGCGC AGCGCAATTC GCCCGCGATC
ATCTTCATCG ACGAGATCGA CTCGATCGCG CCGAAGCGCG AGGAGGCCCG CGGCGAGGTG
GAGCGCCGCA TCGTCGCCCA GCTCCTCACC CTGATGGACG GGCTGGAGCC GCGCCAGAAC
ATCGTGGTGA TCGGGGCGAC GAACCGGCGC GACGCGATCG ACGAGGCCCT GCGCCGGCCC
GGCCGCTTCG ACCGCGAGAT CGTGATCGGC GTGCCCGACG AGCCGGGCCG GCGCGAGGTG
CTGACCATCC ACACCCGCGG CATGCCGCTC GGCGACACCG TCGACCTCGA CGAGATCGCC
CGCACCACCT ACGGCTTCGT GGGGGCCGAC CTCGCGGCGC TCGCCCGCGA GGCGGCCATG
GACGCGCTGC GGCGCGTGCT GCCGCAGATC AACCTGAAGG AGGGGATCCC GCCGGAGATC
CTCGAGACCC TGCAGGTCTG CCGCGAGGAT TTCCTCAACG CCCTCAAGCG GGTCCAGCCC
TCGGCGCTGC GCGAGATCAT GATCCAGGTG CCGAATGTCG GCTGGGACGA CGTCGGCGGG
CTCGGCGACG TCCAGACCCG CCTGCGCGAG GGCGTGGAAC TGCCCCTCAA GAACCCGGAG
GCGTTCCGGC GCATCGGCAT CCGGCCGGCC AAGGGCTTCC TGCTGTTCGG GCCGCCCGGC
ACCGGCAAGA CGCTGCTCGC CAAGGCGGTG GCGCGGGAGG CCTCGGCGAA TTTCGTGGCG
ACGAAGTCCT CGGACCTGCT CTCGAAATGG TACGGCGAAT CCGAGCAGCA GGTCTCGCGC
CTGTTCGCCC GGGCCCGGCA GGTCGCCCCG ACCGTGATCT TCATCGACGA GATCGACTCG
CTCGCGCCGG TGCGCGGCGG CGGCCTCGGC GAGCCCGCCG TGACCGAGCG GGTGGTCAAC
ACGATCCTGG CCGAGATGGA CGGGCTGGAG GAGCTGCAGG GCGTGGTGGT GATCGCCGCC
ACCAACCGGC CGAACCTGGT CGATCCGGCC CTGCTGCGGC CGGGCCGCTT CGACGAACTC
GTCTACGTGC CGGTGCCGAG CGCGGAGGGC CGCCGCCACA TCCTGGGCAT CCACACCCGC
GGGATGCCGC TCGCCCGCGA CGTCGACCTC GACGACCTCG CGGCCCGCAC CGTGCGCTTC
ACCGGGGCGG ACCTGGAGGA CCTCACCCGC CGGGCCGGCC TGATGGCGCT GCGGGCGGAC
CTCGCGGCGA GCGAGGTGAC GCGGGCGCAT TTCGAGGCCG CGCTGCACGA GACGCGCCCC
TCGGTGACGC CCGAGATGGA GCAGGATTAC GAGACGATGC TGCGCACCCT CAAGCAGGAG
GGACCGCAGC GCCAGCCGAT CGGGTTCATG CCGATCCGGC AGGCGGCCGA GTGA
|
|---|
| Protein sequence | MAEDTGSVRA QVANARAQDV GRGVARVGAA VLRSLHLQEG DPIEIVGKRH TTALAIALGA
EDEGLSIIRL DGLQRVNAGV SSGDHVEIKR AEVRPANRVV LAPAQKNLRL QGSAEALRRT
FFRRPLMAGD VISTSVQSRM GHDDVPPELR SMFNLPAYGL QEIRLVVVST QPRGIVQVTA
ETEIDLRPIY EEPKEARRAD VTYDDIGGLG STVDQVREMV ELPLRHPELF QRLGIDPPKG
VLLYGPPGTG KTLLARAVAN ETEAQFFHIA GPEIMGSQYG ESEQRLRQIF SDAQRNSPAI
IFIDEIDSIA PKREEARGEV ERRIVAQLLT LMDGLEPRQN IVVIGATNRR DAIDEALRRP
GRFDREIVIG VPDEPGRREV LTIHTRGMPL GDTVDLDEIA RTTYGFVGAD LAALAREAAM
DALRRVLPQI NLKEGIPPEI LETLQVCRED FLNALKRVQP SALREIMIQV PNVGWDDVGG
LGDVQTRLRE GVELPLKNPE AFRRIGIRPA KGFLLFGPPG TGKTLLAKAV AREASANFVA
TKSSDLLSKW YGESEQQVSR LFARARQVAP TVIFIDEIDS LAPVRGGGLG EPAVTERVVN
TILAEMDGLE ELQGVVVIAA TNRPNLVDPA LLRPGRFDEL VYVPVPSAEG RRHILGIHTR
GMPLARDVDL DDLAARTVRF TGADLEDLTR RAGLMALRAD LAASEVTRAH FEAALHETRP
SVTPEMEQDY ETMLRTLKQE GPQRQPIGFM PIRQAAE
|
|---|
| |