Gene M446_6824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6824 
Symbol 
ID6135334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7520952 
End bp7522148 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content76% 
IMG OID641646905 
Productmajor facilitator transporter 
Protein accessionYP_001773503 
Protein GI170744848 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACGC CCCCTGCCTC CCACCCCTCC CGCGGCGAGG GCCTGCCGCT CCCGGGCCTC 
CTCGCCCTCG CCATGGCGGG TTTCATCACC ATCCTCACCG AGGCGTTGCC GGCCGGCCTG
CTGCCGCAGA TCGGCGCGGA TCTCGCCGTC TCCGAGGCCG TCGCCGGGCA GTTCGTCACG
GTCTACGCCG CCGGCTCGCT CCTCGCCGCC ATCCCGGTGA CCGCGGCGAC GCGGCCGCTG
CGGCGGCGCC CGCTGCTGAT CGCCGCGATC GCGGGCTTCG CCGTCGCCAA CACCGTGACG
ACCCTGTCCG GCTCCTACGC CCTGACCCTC GCGGCGCGCG CGGTCGCCGG CATCTCGGCG
GGGCTGCTCT GGGCGCTCCT GGCCGGTTAC GCGGCCCGGA TGCTGCCCGA GGCCGCGCGG
GGCCGCGCCA TCGCGGTCGC CATGGCCGGC ACGCCGCTGG CGCTGTCGAT CGGCATCCCG
GCCGGCACCT TCCTCGGCGC CCTGATCGGC TGGCGCGCCT GCTTCGGCCT GGTGACGGGG
CTCAGCGGGA TCCTGATCGT CTGGGTTCTG GCCGCCCTGC CCGATCCTCC CGGACAGGCG
GCCGGCCGCG GGCTGCCGCT CTCCCGCGTG GCGTCCATGG CCGGGATCCG GCCGGTCCTC
GCCGCGACGC TGACCTTCGT GCTCGCGCAC ACCATCCTCT ACACCTACAT CGCGCCGTTC
CTCGACGCGG CGGGGCTCGG CGCCCGCACC GATCGCGTGC TGCTCGTCTT CGGCGCGGCC
TCGGTGCTCG GCCTCGGCAT CGTCGGCCTC CTCGTCGATC GCCGGTTGCG GACGCTGACG
CTCCTCAGCA CGGCCCTGTT CGGCCTCTCG GCGCTGGGTC TCGCCCTCGG CGGCGGCGCG
GCGCTCCTGA TCGCGGCGGT CGCCGCCTGG GGCCTCGCCT TCGGCGGCGC CGCGACGCTG
TTCCAGACGG CCCTCAGCCG GTCCGCCGGG GATGAGGCGG ACGTCGCGCA GGCGATGCTG
GTGACGACCT GGAACCTCGC CATCGCGGGG GGCGGCCTGC TCCTGGAGCG GGTCGGCGCC
CAGGGCCTGC CGCCGGCGCT CATGATCCTG CTCGTCCCGA GCTTCCTCGT CGTCCTGCGC
GCCCGGCACC ACGGCTTCCC GCCGGCCGCG CCACCCTCAC CCCTCGAAGG AGCGTGA
 
Protein sequence
MRTPPASHPS RGEGLPLPGL LALAMAGFIT ILTEALPAGL LPQIGADLAV SEAVAGQFVT 
VYAAGSLLAA IPVTAATRPL RRRPLLIAAI AGFAVANTVT TLSGSYALTL AARAVAGISA
GLLWALLAGY AARMLPEAAR GRAIAVAMAG TPLALSIGIP AGTFLGALIG WRACFGLVTG
LSGILIVWVL AALPDPPGQA AGRGLPLSRV ASMAGIRPVL AATLTFVLAH TILYTYIAPF
LDAAGLGART DRVLLVFGAA SVLGLGIVGL LVDRRLRTLT LLSTALFGLS ALGLALGGGA
ALLIAAVAAW GLAFGGAATL FQTALSRSAG DEADVAQAML VTTWNLAIAG GGLLLERVGA
QGLPPALMIL LVPSFLVVLR ARHHGFPPAA PPSPLEGA