| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6692 |
|---|
| Symbol | |
|---|
| ID | 6133701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7364898 |
|---|
| End bp | 7365620 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641646778 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001773377 |
|---|
| Protein GI | 170744722 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.341213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTACC CGAATGCCGC CACCCTCGCC CCGGCCGAGC CCAAGCCCTC CCTGCCCTCC
ACGGTGCAGC AGCACCTCGG GCGGCAGCTG CGGGAGGCCT ACGCGGCGAT CGAGACCGCC
ACCCCGGACA CGGTCCTGGC GCTGATCGAG CGGCTCGAAG CCGCGCTCGC CGCCCAGGGG
CGCAGCGTCG AGCCGGAGTT CCGCGACGGG CTCCTCTCCG CCCTGCCCTC GCTGCGGGCC
TTCGCGCTCT CGCTCACCAA CAATTCCGCC CGGGCGGACG ACCTCGTGCA GGACACGATC
CTGCGCGCCT GGCAGAACCA GCACCGCTTC CAGCCGGGCA CGAACCTCAA CGCGTGGCTG
TTCACCATCC TGCGCAACGC CTTCTACTCG GAGCAGCGCA AGCGCATGCG CGAGGTGCAG
GACGAGGACG GGACCTACGC GGCGCGGCTG TTCTCGGCCC CCGACCAGGG CCACCGCCTG
GACGTGCAGG ACCTGCGCGC CGGCCTCGCC AAGCTGCCGC CGGACCAGCG CGAGGCGCTG
ATCCTGGTCG GGGCCGAGGG CCTGTCCTAC GAGGAGGTCG CCCGGATCTG CGGCGTGGCG
ATCGGGACCA TCAAGAGCCG CGTCAACCGC GCCCGCAACC GGCTCGCCGA CCTCCTCGGC
TACACGGAGG ACGACCTCAA CGGCGACCGG ATGATCCAGT CCGCCATGGG CGAGGGCGCC
TGA
|
|---|
| Protein sequence | MLYPNAATLA PAEPKPSLPS TVQQHLGRQL REAYAAIETA TPDTVLALIE RLEAALAAQG
RSVEPEFRDG LLSALPSLRA FALSLTNNSA RADDLVQDTI LRAWQNQHRF QPGTNLNAWL
FTILRNAFYS EQRKRMREVQ DEDGTYAARL FSAPDQGHRL DVQDLRAGLA KLPPDQREAL
ILVGAEGLSY EEVARICGVA IGTIKSRVNR ARNRLADLLG YTEDDLNGDR MIQSAMGEGA
|
|---|
| |