| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6648 |
|---|
| Symbol | |
|---|
| ID | 6129627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7316906 |
|---|
| End bp | 7318081 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641646736 |
|---|
| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_001773335 |
|---|
| Protein GI | 170744680 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0123873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGGT TCTTCTCCTC GGCGCCCGCG ACCTGCATCG AGGACCTGCG CGTGCTCGCC
GAGCGGCGGG TGCCGCGGAT GTTCTACGAC TATGCCGATT CCGGCTCCTA CACCGAGGGC
ACCTACCGGG CGAACGAGGC CGATTTCGCC GCGATCAAGC TGCGCCAGCG CGTCGCCGTC
GACATGACGA ACCGCACCCT CGCCAGCACC ATGGTCGGCC AGCCGGTCAG CATGCCGGTG
GCCCTCGCGC CGACCGGCCT CACCGGCATG CAGCACGCGG ACGGCGAGAT CCTGGCGGCC
CGGGCCGCCG CCAAGGCCGG CGTGCCCTTC ACGCTCTCGA CCATGAGCAT CTGCTCGATC
GAGGACGTCG CCGAGAACAC CGACCGGCCG TTCTGGTTCC AGCTCTACGT CATGCGCGAC
CGGGACTTCA TCAACCGGCT GATCGACCGC GCCAAGGCGG CCGGCTGCTC GGCCCTGGTG
CTCACCCTCG ACCTGCAGAT CCTCGGCCAG CGCCACAAGG ACATCAAGAA CGGGCTGTCC
ACCCCGCCCC GGATGACCCT GCCGAACATC CTCAACCTCG CCACCAAGCC GCGCTGGTGC
CTGGACATGC TGCGCACGCA GCGCCGCACC TTCCGCAACA TCGTCGGTCA CGCGAAGGGG
GTGAGCGACC TCTCCTCGCT CTCCTCCTGG ACCGCCGAGC AGTTCGACCC GACCCTCAAC
TGGGACGACG TGAAGCGCAT CCAGGACCGC TGGGGTGGCC CGCTCATCCT CAAGGGGATC
CTCGATCCGG AGGATGCGGA GCTCGCGGCG CGCAGCGGCG CCCAGGCCCT CATCGTGTCG
AACCACGGCG GGCGTCAGCT GGACGGGGCG CCCTCCTCGA TCACGGCCCT GCCGGCGATC
GCCGAGGCGG TCGGCAGCCG CATCGAGGTG CTGATGGACG GGGGGATCCG CTCGGGGCAG
GACGTCATCA AGGCGCTGGC GCTCGGCGCC AAGGGCGTCT TCATCGGCCG CGCCTTCCTG
TACGGGCTCG GGGCCGGCGG CGAGGCGGGC GTCACCCAGT GCCTCGACAT CATCCGCAAG
GAACTCGACA CCACCATGGC GATGTGCGGC CTGCGCGACG TCAAGGCGGT GACCTCGGAC
ATCCTGGCGA CGCGCTTCGC GCCCGTCGCC GCGTGA
|
|---|
| Protein sequence | MSRFFSSAPA TCIEDLRVLA ERRVPRMFYD YADSGSYTEG TYRANEADFA AIKLRQRVAV
DMTNRTLAST MVGQPVSMPV ALAPTGLTGM QHADGEILAA RAAAKAGVPF TLSTMSICSI
EDVAENTDRP FWFQLYVMRD RDFINRLIDR AKAAGCSALV LTLDLQILGQ RHKDIKNGLS
TPPRMTLPNI LNLATKPRWC LDMLRTQRRT FRNIVGHAKG VSDLSSLSSW TAEQFDPTLN
WDDVKRIQDR WGGPLILKGI LDPEDAELAA RSGAQALIVS NHGGRQLDGA PSSITALPAI
AEAVGSRIEV LMDGGIRSGQ DVIKALALGA KGVFIGRAFL YGLGAGGEAG VTQCLDIIRK
ELDTTMAMCG LRDVKAVTSD ILATRFAPVA A
|
|---|
| |