Gene M446_6644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6644 
Symbol 
ID6129623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7312104 
End bp7312874 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content75% 
IMG OID641646732 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001773331 
Protein GI170744676 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.004318 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGGAAAG CCTCGGTCGA GGAAGCGGGG GAGGACGGGA TTCAGGAGCC GCGCGGCGCG 
ATCACGGGGC AGGAGGCGGG CCGGTCCGCC GCGGCGCCCG CGCGCCGGTT CGCCCGCGCG
CTGCGCCTGC TCGTGCTGCT GCCTTTCACC GCGGTGATCC TCGTCCTGTG CCTCGCGCTC
GTCTATCGCG CGGTCGATCC GCCCTCAACC CTCATGCTCG GCCGCTGGCT GACCGGCCGG
CCGGTCGAGC GGGACCGCGT CCCGCTCGCC GGCATCGCCC CGGTCCTGGT CCAGGCGGTG
ATCGCCTCCG AGGACCAGCG CTTCTGCCTG CACCGGGGCG TCGACTGGGA GGCGCTCGGC
GAGGTGGTGA GCGACGAGGA CGGGCCGAGC CGCGGCGCCT CCACGGTCAC CATGCAGACG
GTCAAGAACG TTTTCCTGTG GCCCGGCCGC TCCTACCTGC GCAAGGCGAT GGAGATCCCC
CTCGCGCTGC TGGCGGACCT GGTCTGGGGC AAGCGGCGGA CGATGGAGAT CTACCTCAAC
GTGGCCGAGT GGGGGGACGG CATCTACGGC GCGGAGGCCG CCGCCCGTCA CTGGTTCGGC
AAGGGCGCCC GCGACCTCAC CCGGAGCGAG GCGGCGCTCC TCGTCGTCGC CCTGCCCAAC
CCGGCGGCCC GCAGCCCGGC CCACCCGTCG CGGGGCTTGA GGGCGCTCGC CGGGCGCCTG
CAGGCGCGCC TGGCGCGCAT CGGCTCGCTC GCCGCCTGCG TCCGGCCCTG A
 
Protein sequence
MGKASVEEAG EDGIQEPRGA ITGQEAGRSA AAPARRFARA LRLLVLLPFT AVILVLCLAL 
VYRAVDPPST LMLGRWLTGR PVERDRVPLA GIAPVLVQAV IASEDQRFCL HRGVDWEALG
EVVSDEDGPS RGASTVTMQT VKNVFLWPGR SYLRKAMEIP LALLADLVWG KRRTMEIYLN
VAEWGDGIYG AEAAARHWFG KGARDLTRSE AALLVVALPN PAARSPAHPS RGLRALAGRL
QARLARIGSL AACVRP