Gene M446_6622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6622 
Symbol 
ID6130885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7289029 
End bp7290243 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID641646711 
Productradical SAM domain-containing protein 
Protein accessionYP_001773310 
Protein GI170744655 
COG category[R] General function prediction only 
COG ID[COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.220752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACC GGCTCGCCAA GAAGCTCACC ATCCTCGCCG ACGCGGCGAA GTACGATGCC 
TCCTGCGCCT CCTCGGGGGC GCCGAAGCGC CGCGCCGCGG CCGGGGAACT CGGCTCGACG
ACGGGGGCGG GGATCTGCCA CGCCTACACG CCGGACGGGC GCTGCGTCTC GCTGCTGAAG
ATCCTGCTCA CCAATTACTG CCTGTTCGAC TGCGCCTATT GCGTGAACCG GCGCTCCTCG
AACGTGCGGC GGGCCGCCTT CACGGTGGAG GAGGTGATCA CCCTCACGGT GGAGTTCTAC
AAGCGCAACA TGATCGAGGG GCTGTTCCTG TCCTCGGGGA TCGTCCGCTC GCCCGACCAC
ACGATGGAGC AGCTGATCCG GGCGGCGAAG GGCCTGCGCC AGCGGCACGG ATTCCGCGGC
TACATCCATC TCAAGACGAT CCCGGAGGCC AGCCCCTGGC TGATCGAGCA GGCGGGCCTC
TACGCCGACC GGCTCTCGAT CAACCTCGAA CTCCCCACCG AGGCGAGCCT GGAGCGGCTC
GCCCCCGAGA AGGACGGCGC CGCGATCGAG GCCGCGATGG GCCAGATGCG CGAGCGCATC
GCGCAGGGCA GGGCGGAGAA GCGCCGCTAC GCCCCGGCCG GGCAATCGAC CCAGGTCATC
GTCGGGGCCG ATTCCTCGAC CGACGCCGCC CTGATCCGCC GCAGCGCCGC CCTCTACGCC
AGCCACGACC TGCGGCGCAT CTACTACTCG GCCTTCAGCC CGATCCCGGA CGCCTCCGCG
ATCCTGCCGC CGCAGGCGCC GCCCCTCGCC CGCGAGCACC GGCTCTACCA GGCGGATTGG
CTCCTGCGGT ACTACGCCTT CGCCCCCGAG GAGGTGGCGG ACGCCACCGA GGCGGGCATG
CTCGCCCTCG ACATCGACCC CAAACTCGCC TGGGCGCTCA AGCACCGCGA GCGGTTCCCC
GTCGACGTCA ACCGGGCCGA CCGGGACTTG CTGCTGCGGG TGCCGGGCCT GGGCGTGCGG
GCGGTGGACC GGATCGTGGC GGCGCGCCGC CACACCCGGC TTCGCCTCGC GGACGTGGCG
CGGCTGACCT CGGGCCTGAA GCGCGCGCGG CCCTTCCTGA TCGCCGCCGA CCATGCCCCG
ACCCGGCTGA CCGACCGGTC CGACCTGCGG GCGCGCCTCG CCGAGCCGCC GCGCCAGCTC
TCCCTGTTCG GGTGA
 
Protein sequence
MDDRLAKKLT ILADAAKYDA SCASSGAPKR RAAAGELGST TGAGICHAYT PDGRCVSLLK 
ILLTNYCLFD CAYCVNRRSS NVRRAAFTVE EVITLTVEFY KRNMIEGLFL SSGIVRSPDH
TMEQLIRAAK GLRQRHGFRG YIHLKTIPEA SPWLIEQAGL YADRLSINLE LPTEASLERL
APEKDGAAIE AAMGQMRERI AQGRAEKRRY APAGQSTQVI VGADSSTDAA LIRRSAALYA
SHDLRRIYYS AFSPIPDASA ILPPQAPPLA REHRLYQADW LLRYYAFAPE EVADATEAGM
LALDIDPKLA WALKHRERFP VDVNRADRDL LLRVPGLGVR AVDRIVAARR HTRLRLADVA
RLTSGLKRAR PFLIAADHAP TRLTDRSDLR ARLAEPPRQL SLFG