| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6584 |
|---|
| Symbol | clpX |
|---|
| ID | 6134415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7241790 |
|---|
| End bp | 7243061 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641646674 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_001773274 |
|---|
| Protein GI | 170744619 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.138362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG CTGGCGGCAA CGACTCGAAG AGCACGCTGT ACTGCTCGTT CTGCGGCAAG
AGCCAGCACG AAGTCCGCAA GCTGATCGCG GGACCGACCG TCTTCATCTG CGATGAGTGC
GTCGAGCTGT GCATGGACAT CATCCGCGAG GAATCGAAGT CCTCGCTGGT GAAGTCGCGG
GACGGCGTAC CGACCCCGAA GGAAATCCGT CGCGTCCTCG ACGATTACGT GATCGGGCAG
GATTTCGCCA AGAAGGTGCT GTCGGTCGCG GTGCATAATC ACTACAAGCG GCTGGCGCAC
GCGGCGAAGC ACAACGACGT CGAGCTCGCG AAGTCCAACA TCCTGCTGAT CGGGCCGACC
GGTTCCGGCA AGACGCTGCT GGCGCAGACG CTCGCCCGGA TCCTCGACGT GCCCTTCACG
ATGGCGGATG CGACGACGCT GACCGAGGCC GGCTACGTTG GCGAGGACGT CGAGAATATC
ATCCTTAAGT TGCTCCAGGC CTCCGACTAC AACGTGGAGA GGGCCCAGCG CGGCATCGTC
TACATCGACG AGATCGACAA GATCTCGCGC AAGTCCGACA ATCCGTCGAT CACCCGCGAC
GTGTCGGGCG AGGGCGTGCA GCAGGCCCTG CTGAAGATCA TGGAGGGCAC GGTGGCGAGC
GTGCCGCCCC AGGGCGGACG CAAGCACCCG CAGCAGGAAT TCCTGCAGGT CGACACCACC
AACATCCTGT TCATCTGCGG CGGCGCCTTC GCGGGGCTGG AGCGGATCAT CTCGGCCCGG
GGCAAGGGCA CCTCGATCGG CTTCGGCGCC ACCGTCCAGG CCCCGGACGA CCGCCGCACC
GGCGAGATCT TCCGGGCCGT CGAGCCCGAG GACCTGCTGA AGTTCGGGCT CATTCCCGAA
TTCGTCGGCC GCCTGCCGGT GCTCGCCACC CTGGAGGACC TCGACGAGAC CGCCCTCAAG
CGGATCCTGC AGGAGCCCAA GAACGCCCTG GTCAAGCAGT ACCAGCGGCT GTTCGAGATG
GAGAACGTCG ACCTCACCTT CCAGGAGGAG GCGCTGACGC TCGTCGCCCG CAAGGCAATC
GAGCGCAAGA CCGGCGCCCG CGGGCTGCGC TCGATCCTGG AGAGCATCCT GCTGGAGACG
ATGTACGACC TGCCGGGCCT CGACTCGGTC GAGCAGGTGG TCATCGGCCC CGAGGTGGTC
GAGGGCAAGG CGAGGCCCCT CTACATCCAC GGGGACCGCG CCAAGGACGC CCCGGCGAGC
GTCAGCGCCT GA
|
|---|
| Protein sequence | MSKAGGNDSK STLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ESKSSLVKSR
DGVPTPKEIR RVLDDYVIGQ DFAKKVLSVA VHNHYKRLAH AAKHNDVELA KSNILLIGPT
GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQASDY NVERAQRGIV
YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT
NILFICGGAF AGLERIISAR GKGTSIGFGA TVQAPDDRRT GEIFRAVEPE DLLKFGLIPE
FVGRLPVLAT LEDLDETALK RILQEPKNAL VKQYQRLFEM ENVDLTFQEE ALTLVARKAI
ERKTGARGLR SILESILLET MYDLPGLDSV EQVVIGPEVV EGKARPLYIH GDRAKDAPAS
VSA
|
|---|
| |