| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6583 |
|---|
| Symbol | clpP |
|---|
| ID | 6134414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7240888 |
|---|
| End bp | 7241514 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641646673 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_001773273 |
|---|
| Protein GI | 170744618 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0700115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACC CCGTCGAATT CTACAACAGC GCGCTCGTCC CCATGGTGGT CGAGCAGTCG
AGCCGCGGCG AGCGCGCCTT CGACATTTAC TCGCGCCTGT TGCGCGAGCG CATCATCTTC
CTGACCGGGC CGGTCGAGGA CTACTCCGCC TCGCTCATCG TGGCGCAGCT GCTGTTCCTC
GAAGCCGAGA ACCCGAAGAA GGAGATCTCC TTCTACATCA ACTCGCCGGG CGGCGTGGTC
ACGTCGGGCC TGTCGATCTA CGACACGATG CAGTTCATCC GCTGCCCGGT GGCGACGCTC
TGCGTCGGGC AGGCGGCCTC GATGGGCTCG CTGCTCCTCG CCGCGGGCGA GCCGGGCCAC
CGCTTCGCGC TGCCGAACGC GCGCATCATG GTCCACCAGC CCTCCGGCGG CTTCCAGGGC
CAGGCCACCG ACATCCTGAT CCACGCCCGC GAGATCGAGG CGCTGAAGCG CCGCCTCAAC
GAGATCTACG TGAAGCACAC CGGCCGCGAC TACGACGCGA TCGAGCAGGG GCTGGAGCGC
GACAATTTCA TGACAGCCGA CGCCGCCAAG GAGTGGGGCC TCATCGACGA GGTGCTGCAG
AAGCGGGCGG AGACGCCCGC CGCCTGA
|
|---|
| Protein sequence | MRDPVEFYNS ALVPMVVEQS SRGERAFDIY SRLLRERIIF LTGPVEDYSA SLIVAQLLFL
EAENPKKEIS FYINSPGGVV TSGLSIYDTM QFIRCPVATL CVGQAASMGS LLLAAGEPGH
RFALPNARIM VHQPSGGFQG QATDILIHAR EIEALKRRLN EIYVKHTGRD YDAIEQGLER
DNFMTADAAK EWGLIDEVLQ KRAETPAA
|
|---|
| |