Gene M446_6579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6579 
Symbol 
ID6134600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7235833 
End bp7236579 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID641646668 
Producthypothetical protein 
Protein accessionYP_001773269 
Protein GI170744614 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0167613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAC ATTCGCAGTT CAAGAACATC ATGCACCGCA AGGGCCGCGT CGACGCGGTC 
CGCTCCAAGG TCTTCGGCAA GCTCGCGCGC GAGATCACGG TGGCCGCCAA GCTCGGCGTG
CCGGACCCGG CCATGAACCC GCGCCTGCGC GCCGCGATGC TGGCGGCCCG GGCCGAGAAC
ATGCCCAAGG ACAACATCGA GCGCGCGATC AAGAAGGCGA CCGGCGGGGA AGGGGAGAAT
TACGAGGAGA TCCGCTACGA GGGCTACGGC CCGGGCGGGG CGGCGCTGAT CGTCGAGGCG
CAGACCGACA ACCGCAACCG CACGGCCTCG GACGTGCGCT CGGCCTTCAC CAAGGCCGGC
GGCAGCCTCG CCGAGACGGG CGCGGTCTCG TTCATGTTCG ACCGGGTCGG GCTCGTCGCC
TTCGACGCGA AGGTGGCGGA CGCCGACGCG ATGCTGGAGG CCGCCATCGA GGCGGGCGCC
GACGACGTCA AGTCGGACGA GAGCGGCCAC GAGGTCACCT GCGAGCACGG CGCCCTCGGG
GAGGTCGCCA AGGCCCTCGA GGCCCGCTTC GGCGAGCCCC GCCGCACCGC CCTGGTCTGG
CGCCCGCAGA ACACCGTCGA GGTCGACGAC GAGACCGGCG AGAAGCTGAT CCGCCTCGTC
GAGATGATCG AGGACCAGGA CGACGTCCAG AACGTCTTCG TGAACTTCGC GGTCTCGGAC
GCGCTGATGG CCCGGATGCA GGACTGA
 
Protein sequence
MAGHSQFKNI MHRKGRVDAV RSKVFGKLAR EITVAAKLGV PDPAMNPRLR AAMLAARAEN 
MPKDNIERAI KKATGGEGEN YEEIRYEGYG PGGAALIVEA QTDNRNRTAS DVRSAFTKAG
GSLAETGAVS FMFDRVGLVA FDAKVADADA MLEAAIEAGA DDVKSDESGH EVTCEHGALG
EVAKALEARF GEPRRTALVW RPQNTVEVDD ETGEKLIRLV EMIEDQDDVQ NVFVNFAVSD
ALMARMQD