Gene M446_6562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6562 
Symbol 
ID6134277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand+ 
Start bp7219396 
End bp7220028 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content73% 
IMG OID641646651 
ProductTetR family transcriptional regulator 
Protein accessionYP_001773252 
Protein GI170744597 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.67895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0476005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATG GTCCCACCAC CCTCGACGCG GCGGAGAGCG ACAAGCGCCG TCAGATCCTC 
GACGGCGCGC GCGAGGTCTT CCTCGCCTGC GGCTTCGACG GGGCGAGCAT GGGCAGCATC 
GCCAAGGCGG CGGGGGTCTC GAAGGGCACG CTCTACGTCT ACTTCGACAG CAAGGAGGCG 
CTGTTCGAGG CGCTGACCGT CGAGGAGAAG CGCACCCTCG CCGAGAACCT CTTCCGCCTC 
GACGTCGACG ACCCCGACGT GCCGGCGGTG CTGCGGCGGC TCGGCCTGAG CTTCCTCGAC 
GAGATGTGCC GGCCCGACCA CGTGGCCTCG ATCCGCACGG TGATCGGCGC CTCGGAGAAG 
TTCCCGCGGC TCGGCCGCGC CTTCTACGAG GCGGGTCCGG TCCAGGGCGC GCAGCGGCTG 
CGGGCCTATC TCGACCGGCA GGTGGCGGCG GGGCGCCTGC GCCCGACCGA CACGGCGCTG 
GCCGCGCGCC ACTTCCTCGA CCTCTGCGCG GCGGCGACGA TGCGGCGCCT GCTCTTCGCG 
GTGGGCGATC CGCCGACCCC GGCGGAAGCG GCCTACCTGA TCGGCGAGGC GGTGCGGGTG 
TTCTTCGCGG CCTACGGGCC GGCGCGGTCC TGA
 
Protein sequence
MADGPTTLDA AESDKRRQIL DGAREVFLAC GFDGASMGSI AKAAGVSKGT LYVYFDSKEA 
LFEALTVEEK RTLAENLFRL DVDDPDVPAV LRRLGLSFLD EMCRPDHVAS IRTVIGASEK 
FPRLGRAFYE AGPVQGAQRL RAYLDRQVAA GRLRPTDTAL AARHFLDLCA AATMRRLLFA 
VGDPPTPAEA AYLIGEAVRV FFAAYGPARS