Gene M446_6561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6561 
Symbol 
ID6134276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7217981 
End bp7219174 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content75% 
IMG OID641646650 
Productsecretion protein HlyD family protein 
Protein accessionYP_001773251 
Protein GI170744596 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0560581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0514365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATC GGGACGAGTA CGCGCAGGGT CAGGGCGTGC AGGGTGAAGC GGCGCGCGAC 
CGGGCTGCGC CGGACGCCGC GCCGGGAACG CCGCGGCGTC GCCTGCGCCG AGTCCTGCTG
CCGCTCGCCC TGCTCGCCGC CCTCGGAGCG GGCGGCCGCG AGGGCTATTT CTGGTACACG
ACCGGCCGCT TCCTCGTGTC GACCGACGAC GCCTACGTGC AGGCCGACAT CGCGACGCTC
GCCGCCAAGG TCTCGGGCTA CCTCGCTTCC GTCCCGGTGG TGAACGGGCA GACGGTGCGG
GCGGGCGACG TCATCGCGCG CATCGACGAC GGCGATTACC GGCTCGCCCT GCGGGCGGCC
GAGGACAAGC TGGCGACGCA GCGCAGCACC ATCGCGCGCA TCGCCCGCCA GGTCGAGGCG
GCCCGCGCCC AGGTGGCGCA GGGCGAGGCG CAGGTCGAGG CGGCCCGCGC CGACCAGGTG
CGCGCGGCGG CCGATTACCA GCGCCAGACG CAGCTCGCCC AGTCCGAATT CGCCGCCCGC
GCCCGCCTGG AGCAGGCCAA GGCCGATCGC GACCGCTCGG ACGCCAACGT CAAGGCCGCC
GAGGCGGCCC TGCTCGCCGC CAAGGCCAAC GTGGCGGTGC TGGAGGCGCA GGGCCGCGAG
GCCGAGAGCC TCGCGGCCGA GCTCAGGACC GGGGTGGACC GCGCCGCCCG CGACCTCTCC
TTCACGGAGC TGCGGGCGCC CTTCGACGGG GTGATCGGCA ACAAGGCCGT GGAGGCGGGC
GCCTACGTGC AGCCCGGCTC GCGCGTCGCC GCCCTGGTGC CCCTCGACAG CGTGCGCGTC
GACGCGAACT TCAAGGAGAC GCAGCTCGCC CGCATGCGGG TCGGGCAGCC CGTTCATATC
CGGGTCGATG CCTGGCCCGA CCGCGACATC CTCGGCACGG TCGAGAGCTT CTCGCCGGCC
TCCGGCTCCG TCTTCAGCCT GCTGCCGCCC GACAACGCCA CCGGCAACTT CACGAAGATC
GTCCAGCGCC TGCCGGTGCG GGTGAAGGTG CCGGCCGAGA TCGCCCGGGA GGGCCTGCTG
CGCCCCGGCC TCTCGGTGGT GGCGAAGGTC GACACGCGCG GCCTCGGCGC GGAGGCCCCG
GAGCCGCGCG CGGTCTCGCA CGCCGCCGCG CAGCGGCATG CCGCCCGGGA GTGA
 
Protein sequence
MAYRDEYAQG QGVQGEAARD RAAPDAAPGT PRRRLRRVLL PLALLAALGA GGREGYFWYT 
TGRFLVSTDD AYVQADIATL AAKVSGYLAS VPVVNGQTVR AGDVIARIDD GDYRLALRAA
EDKLATQRST IARIARQVEA ARAQVAQGEA QVEAARADQV RAAADYQRQT QLAQSEFAAR
ARLEQAKADR DRSDANVKAA EAALLAAKAN VAVLEAQGRE AESLAAELRT GVDRAARDLS
FTELRAPFDG VIGNKAVEAG AYVQPGSRVA ALVPLDSVRV DANFKETQLA RMRVGQPVHI
RVDAWPDRDI LGTVESFSPA SGSVFSLLPP DNATGNFTKI VQRLPVRVKV PAEIAREGLL
RPGLSVVAKV DTRGLGAEAP EPRAVSHAAA QRHAARE