| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6560 |
|---|
| Symbol | |
|---|
| ID | 6134275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 7216387 |
|---|
| End bp | 7217976 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641646649 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001773250 |
|---|
| Protein GI | 170744595 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0671945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0275622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCCG CGCCGATCGC CGCCGGGCCC TCGGCCGCCG CGCCGCCGGC CGCCGAGCCG
CCCCTCGACC GCCGCCGCAT GGTGGCGTTC GTCTGCATGG TGTTCGGGAT GTTCATGGCG
ATCCTGGACA TCCAGATCGT CTCGGCCTCC CTCGCCGAGA TCCAGGCCGG CCTCTCGGCC
TCGGCCGACG AGATCCCCTG GGTGCAGACG AGCTACCTCA TCGCCGAGGT GATCTCGATC
CCGCTCTCGG GCATGCTCTC GCGGGTGCTC TCGACCCGCT GGATGTTCGT GATCTCGGCG
GGCGGCTTCA CGCTGATGAG CCTGATGTGC GCGACCTCGT CCTCGATCGG CGAGATGATC
CTGTGGCGCG CCCTCCAGGG CTTCATCGGC GGCGGCATGA TCCCGACCGT CTTCGCCTCG
GCCTTCACGA TCTTCCCGCC CTCGAAGCGG GGCATCGTCT CGCCGATGAT CGGCCTCGTG
GCGACGCTCG CCCCCACCAT CGGCCCGACG GTCGGCGGCT ACCTCACCGA CCTGTTCGAC
TGGCACTGGC TCTTCCTGGT CAACATCCTG CCGGGCCTGT GCGTCACCGT CTCGACCTGG
GCGCTCGTCG ATTTCGACGA GCCGAACCTC GCGCTCCTGC GCCGCTTCGA CTGGGCCGGG
CTCGCCTTCA TGGCGGGCTT CCTGGGCTGC CTGGAATACG TGCTGGAGGA GGGCCCGCTG
CACGACTGGT TCCAGGAGGA GCCGGTGTTC GTGGCCGCGC TCGTCTGCGC GGTCTCGGGG
GTGCTGTTCT TCTGGCGGGC GCTGCGCGCG GAGCAGCCGA TCGTGGACCT GCGCGCCTTC
TCGGACCGCA ACTTCGCGGC CGGCTGCGCG GCGAGCTTCG TGCTCGGGAT CGGGCTCTAC
GGGCTCACCT ACCTCTACCC GGTCTATCTC GGGCGGGTGC GGGGCTACTC CGCCCTGCAG
ATCGGCGAGA CGATGTTCGT CTCGGGGCTG TGCATGTTCG TCACCGCCCC GATCGCCGGA
CGGCTCTCCG GCCGGGTCGA TCCGCGGATC ATGATGGCGC TCGGCTTCAC CGGCTTCGCG
GTGGGCACCT TCCTGGTCAC GGGCCTGACC AAGGATTGGG ATTTCGGGGA GCTGCTGCTG
CCGCAGGTGC TGCGCGGCTG CTCGCTCATG CTCTGCATGA TCCCGATCAA CAACATCGCC
CTCGGCACGC TGCCGCCAGC CCGGATGAAG AACGCCTCCG GCCTCTACAA CCTCACCCGC
AACCTCGGCG GCGCGGTCGG GCTGGCGCTG ATCAACACGG CGCTGAACGA CCGCTGGGAC
CTCCACCTCG CGCGCCTGCA CGAGCGCTTC ACCTGGACGA ACCCGCTGGT GCTGGAGCGG
CTCGACGCGA TGGCGCGCGG CTTCTCGGGG CTCGCCGGGG ATCCGGACGC CATGGCGCTC
AAGGCCATGA TGGGCACCGT GCGCATCCAG GGCCTTCTGA TGAGCTTCTC GGACGTGTTC
CTGATGCTGA CCGGGCTCTT CCTGGCCATG GCCTGCGCGA CGCCGCTGAT CCGGCGCCCC
CGGGCGGGGG CGGGCGGCGG CGGCCATTGA
|
|---|
| Protein sequence | MAAAPIAAGP SAAAPPAAEP PLDRRRMVAF VCMVFGMFMA ILDIQIVSAS LAEIQAGLSA
SADEIPWVQT SYLIAEVISI PLSGMLSRVL STRWMFVISA GGFTLMSLMC ATSSSIGEMI
LWRALQGFIG GGMIPTVFAS AFTIFPPSKR GIVSPMIGLV ATLAPTIGPT VGGYLTDLFD
WHWLFLVNIL PGLCVTVSTW ALVDFDEPNL ALLRRFDWAG LAFMAGFLGC LEYVLEEGPL
HDWFQEEPVF VAALVCAVSG VLFFWRALRA EQPIVDLRAF SDRNFAAGCA ASFVLGIGLY
GLTYLYPVYL GRVRGYSALQ IGETMFVSGL CMFVTAPIAG RLSGRVDPRI MMALGFTGFA
VGTFLVTGLT KDWDFGELLL PQVLRGCSLM LCMIPINNIA LGTLPPARMK NASGLYNLTR
NLGGAVGLAL INTALNDRWD LHLARLHERF TWTNPLVLER LDAMARGFSG LAGDPDAMAL
KAMMGTVRIQ GLLMSFSDVF LMLTGLFLAM ACATPLIRRP RAGAGGGGH
|
|---|
| |