Gene M446_6552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6552 
Symbol 
ID6134043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7206184 
End bp7207437 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID641646641 
ProductSerine--glyoxylate transaminase 
Protein accessionYP_001773242 
Protein GI170744587 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.323999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAT CGAGACGGCC GGGTCGCAAC TTTCTCTTCG TGCCGGGTCC GACCAACGTG 
CCGGAGCGCG TCCAGCGCGC GATGATCGTG CCGATGGAGG ACCATCGCTC GTCGTCGTTC
CCGGACCTGA CGCTGCCCCT GTTCGAGAAC CTGAAGAAGG TGTTCAAGTC GAAGGACGGG
CAGGTCTTCA TCTTCCCGTC GAGCGGCACC GGCGCCTGGG AGGCCGCGCT CACCAACACC
CTGTCGCCCG GCGACCGCGT GCTCGCCTCG CGCTTCGGCC AGTTCAGCAC GCTCTGGATC
GACCTCGCCC AGCGCGTCGG CCTCGACGTC GTCATCCAGG ACGAGGAATG GGGCACCGGC
GCCAATCCGG AGCGGATCGA GGAGGCCCTG CGGGCCGACC GCGAGCACCG CATCAAGGCC
GTCCTCGTCG TCCACAACGA GACCGCCACC GGCGTGACCA GCGACGTCGG CGCCGTGCGC
CGGGCCATCG ACGCCGCCAA CCACCCGGCG ATGCTCTACG TGGACGGCGT GTCCTCGATC
GGCAGCATCG ACTTCCGCGC CACCGAGTGG GGCGTCGACT GCGCCATCAC CGGCTCGCAG
AAGGGCCTGA TGCTGCCCGC CGGCCTCGGC ATCGTCTGCG TCAGCCCCAA GGCGCTCGCC
GCCTACAAGA CGGCCGAGTG CCGCCGCGTC TACTTCGACT TCGGCGACAT GTCGAAGGCG
AACGCCACCG GCTACTTCCC CTACACGCCG GCCCTGCCCC TGCTCTACGG CCTGCGCGAG
GCCATGGCCT GCCTGTTCGA GGAGGGGCTG GAGCGCGTCT TCGAGCGCCA CCGCGTGCTC
GCCGACGGCT GCCGCGCCGC CGTGAAGGCC TGGGGCCTGA CGCTCTGCGC CAAGGAGCCC
AAGTGGTACT CCGACACGGT GAGCGCCATC ATGGTGCCGG ACGGCGTCAA CGGCGCCGAC
GTGATCGACG TCGCCTTCCG GCGCTACAAC CTCGCGCTGG GCGCCGGCCT GTCCAAGGTC
GCCGGCAAGC TCTTCCGGAT CGGCCATCTC GGCGACCTCA ACGACCTGAT GCTGCTCGGC
GCGCTGGCGG GCGCCGAGAT GGCGATGCTC GACGCCGGCA TCCGGATCGA GCCGGGCAGC
GGCGTCGGCG CGGCCCAGAA GCACTTCCGC GAGACCATCC TGGCCAAGGA CAAGCGCCCG
AGCGAGGCGG GCATCTTCGA CCGCAACCAC TCCGACGGCG TCGTCCGGGT GTGA
 
Protein sequence
MAGSRRPGRN FLFVPGPTNV PERVQRAMIV PMEDHRSSSF PDLTLPLFEN LKKVFKSKDG 
QVFIFPSSGT GAWEAALTNT LSPGDRVLAS RFGQFSTLWI DLAQRVGLDV VIQDEEWGTG
ANPERIEEAL RADREHRIKA VLVVHNETAT GVTSDVGAVR RAIDAANHPA MLYVDGVSSI
GSIDFRATEW GVDCAITGSQ KGLMLPAGLG IVCVSPKALA AYKTAECRRV YFDFGDMSKA
NATGYFPYTP ALPLLYGLRE AMACLFEEGL ERVFERHRVL ADGCRAAVKA WGLTLCAKEP
KWYSDTVSAI MVPDGVNGAD VIDVAFRRYN LALGAGLSKV AGKLFRIGHL GDLNDLMLLG
ALAGAEMAML DAGIRIEPGS GVGAAQKHFR ETILAKDKRP SEAGIFDRNH SDGVVRV