Gene M446_6547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6547 
Symbol 
ID6134005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7199609 
End bp7202080 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content80% 
IMG OID641646634 
ProductATP-dependent helicase HrpB 
Protein accessionYP_001773237 
Protein GI170744582 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01970] ATP-dependent helicase HrpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.639209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGC TCCCCGCCCT GCCGATCGAC GCCGTCCTCG CCGACCTCCA GGCCGCCCTC 
GCCGGACGCC CGAACGCCGT GCTGGTCGCG CCGCCCGGCG CCGGCAAGAC CACCCGGGTG
CCCCTCGCGC TCCTCGACGC GCCCTGGCGG GGCGACGGGC GGATCATCGT GCTGGAGCCC
CGCCGCCTCG CGGCCCGGGC GGCGGCCGAG CGCATGGCCG AGACCCGCGG CGAGCGGGTC
GGCGACACGG TCGGCCTGCG GGTGCGGCTC GGCTCGAAGG TCTCCGCCCG CACCCGGATC
GAGGTCGTCA CCGAGGGCGT CTTCGCCCGC ATGATCCTCG ACGACCCGGA ACTGACCGGG
ATCGCCGCGG TGCTGTTCGA CGAGTTCCAC GAGCGCTCCC TCGACGCCGA TCTCGGCCTC
GCGCTGGCCC TCGACGCGCA GGGCGGCCTG CGCGAGGACC TGCGCCTGCT CGCCATGTCG
GCGACGCTCG ACGGGGCCCG GGTCGCGCGC CTGATGGGCG GGGCGCCGGT GATCGCCTCG
GAGGGCCGCG CCTTCCCGGT CGAGACGCGC TACCTCGACC GCGACCCGAA CCGGCGCGTC
GAGGAGGCGA CGGCCGAGGC GATCGAGCGG GCGCTGCGGG CCGAGCCGGG CTCGGTCCTG
GCCTTCCTGC CCGGCCAGGG CGAGATCCGC CGGGTCGCGG AGCTGCTCGC CCCGCGCCTC
GCCGCCCATC CGGAGGTCGA CCTCGCCCCG CTCTACGGGG CCCTCGACCG CGGCGAGCAG
GACCGGGCCG TGCGCCCGAG CCCGCCGGGC CGGCGCAAGG TGGTGCTCGC CACCTCCATC
GCCGAGACGT CGCTCACCAT CGAGGGCGTG CGGGTGGTGG TGGATTCCGG GCTCGCCCGC
GTGCCGGTCT ACGAGCCGGA TCTCGGCCTC ACCCGCCTCG CGACGGTCCG GGCCTCGCGG
GCCTCGGTCG ACCAGCGCCG CGGCCGCGCC GGGCGCACGG AGCCGGGAAT CTGCTACCGG
CTCTGGGCGG AGGCGGCGAC CGGGGCGCTG GAGCCCTTCA CCCGGCCGGA GATCCTCTCG
GCCGACCTCG CGGGCCTCGT CCTCGACTGC GCCGCCTGGG GCGTGGCCGA TCCCGCCACC
CTGCCCTTCC TCGACCCGCC CCCCGGCCCG GCGCTCGCGG AGGCGAAGGC GCTGCTCGCC
GGGCTCGGCG CCCTCGACGC CGGGGGCCGG CTGACGCCCG AGGGGCGCCG CCTGCGCGCC
CTGCCGCTGC CGCCGCGGCT CGCCCGCATG GTGGTGGCGG CGGCGGCCGA GGGACGGGCG
GCGGCGCGGG AGGCGGCCGA CCTCGCCGCC GTGCTGGTCG AGCGCGGCCT CGGCGGCGAC
GCGGTCGACC TCGCCGAGCG GGTCGAGCGC TTCCGCCGCG ACCGCTCGGG CCGGGCTGAG
GACATGCGCC GGCTCGCCTC CGGCTGGGCC CGCGCCGCCG GGGCGGGCCC GGCCGAGGGC
GAGGCCCCGC CCCTCGGCGC GCTCCTCGCC CTCGCCTATC CGGACCGGAT CGCCCGCGCC
CGGGGCAGGC CCGGCGAGTT CGTGCTGGCG AACGGCCGCG GCGCCGCCCT CGACCCCGCC
CTGGCGCTCG CCCGCGCGCC CTTCCTGGCG GTGGCCGAGA TCGTCGGCAA GGCCGCCGCC
GCGCGCATCC TGGCGGCGGC GCCGATCGGG CTCGAGGCGA TCGAGGCGCG CTTCGCCGAC
CGGATCGAGG CGCGCGAGAG CGTCGCCTTC GACCCCGCCG CCCGCGCCCT GCGCGCCCGG
GCCCAGCGGC GCCTCGGCGC GGTCACGCTC GGCGAGCGCG TCCTGCCGGT CCCGGCCGAC
GAGGCGAGCG CGCGGCTCCT CGCCCGCGGG ATCGCCGGCC TCGGGCTCGC GGCCCTGCCC
TGGTCGAGGG CGGCGGCGCA GTGGCGCGAG CGGGTCTCCT TCCTGCGCCG GGCCGAGGGC
GAGCCCTGGC CCGACGTCTC CGACGCGGCG CTCGCGGCGG CGGCCGAGGA CTGGCTCGCG
CCGCACCTCC TCGGCCTCAC CCGCCTCGAC GAGATCGGGC CGGAGCGCCT CGCCGAGGCG
CTGCACGCGC TCCTGCCCTG GACCCTGCGG GCGCGCCTCG ACGCGGAGGC CCCGACCCAC
GTCGAGGTGC CGACCGGCTC GCGCCTCCCG ATCGATTACG GGGCCGAGGA GCCGGTCCTG
GCGGTGCGGG TGCAGGAGCT GTTCGGGCTC GCCGCACATC CGACGATCGG CGGCGGGCGG
GTGCCGCTGG TGCTGCACCT GCTCTCCCCG GCCCAGCGCC CGATCCAGAT CACCCGCGAC
CTGCCGGGCT TCTGGCGCGG CTCCTGGGCG GCGGTGCGCG CCGACATGCG CGGCCAGTAC
CCGCGGCATC CCTGGCCGGA AGACCCGCTC GGCGCGCCAC CGACCCGGCG GGCGAAGCCC
AGGGGCACCT GA
 
Protein sequence
MPALPALPID AVLADLQAAL AGRPNAVLVA PPGAGKTTRV PLALLDAPWR GDGRIIVLEP 
RRLAARAAAE RMAETRGERV GDTVGLRVRL GSKVSARTRI EVVTEGVFAR MILDDPELTG
IAAVLFDEFH ERSLDADLGL ALALDAQGGL REDLRLLAMS ATLDGARVAR LMGGAPVIAS
EGRAFPVETR YLDRDPNRRV EEATAEAIER ALRAEPGSVL AFLPGQGEIR RVAELLAPRL
AAHPEVDLAP LYGALDRGEQ DRAVRPSPPG RRKVVLATSI AETSLTIEGV RVVVDSGLAR
VPVYEPDLGL TRLATVRASR ASVDQRRGRA GRTEPGICYR LWAEAATGAL EPFTRPEILS
ADLAGLVLDC AAWGVADPAT LPFLDPPPGP ALAEAKALLA GLGALDAGGR LTPEGRRLRA
LPLPPRLARM VVAAAAEGRA AAREAADLAA VLVERGLGGD AVDLAERVER FRRDRSGRAE
DMRRLASGWA RAAGAGPAEG EAPPLGALLA LAYPDRIARA RGRPGEFVLA NGRGAALDPA
LALARAPFLA VAEIVGKAAA ARILAAAPIG LEAIEARFAD RIEARESVAF DPAARALRAR
AQRRLGAVTL GERVLPVPAD EASARLLARG IAGLGLAALP WSRAAAQWRE RVSFLRRAEG
EPWPDVSDAA LAAAAEDWLA PHLLGLTRLD EIGPERLAEA LHALLPWTLR ARLDAEAPTH
VEVPTGSRLP IDYGAEEPVL AVRVQELFGL AAHPTIGGGR VPLVLHLLSP AQRPIQITRD
LPGFWRGSWA AVRADMRGQY PRHPWPEDPL GAPPTRRAKP RGT