| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6522 |
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| Symbol | |
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| ID | 6132080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 7171481 |
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| End bp | 7173166 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641646610 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001773213 |
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| Protein GI | 170744558 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.037846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGG CGAGGCCGGG GCGCACAGCC GCCCGGGTGC TGGTGGATCA GCTGGTGGCG
AACGGGGTGC GCCACGTCTT CACGGTGCCG GGCGAGAGCT TCCTGCCCGT CCTCGACGCG
CTGCGGGATT CCGGCATCGC GGTGACGACC TGCCGCCAGG AGGGGGCGGC CGCCATGATG
GCGGAGGCCC ACGGCAAGGC GACCGGGATG CCCGGGATCT GCTTCGTCAC CCGCGGCCCG
GGCGCCACCA ACGCCTCGGC GGGCCTGCAC GTCGCCCAGC AGGACTCGAC CCCGATGATC
CTGTTCGTCG GCCAGATCGA GCGGCGCTTC CGCGAGCGCG AGGCGTTCCA GGAGCTCGAT
TACCGGGCGG TGTTCGGCCC GATGGCGAAG TGGGCGACCG AGATCGACGA CCCCGACCGG
GTGCCGGAAT TCGTGGCCCG CGCCTTCGCG ACGGCGACGG CCGGGCGGCC CGGCCCGGTC
GTGGTGGCGC TGCCCAAGGA CATGCTGAGC GAGGCGACGG CGGCCCCGCT CGCGCCGCCC
TTCCGGCCGG TCGAGGCGGC GCCGGGGGAG GAGGACGTGG CGCGGCTCGC CGACCTCGTC
GCCTCGGCGG AGCGGCCCCT CCTGCTGCTC GGGGGCAGCC GCTGGAGCGA GGGCGCCTGC
GCGGCCATCG CCCGCTTCGC CGAGGCCTTC GACCTGCCGG TCGCCACCAG CTACCGGCGC
AGCCCCCTGT TCGACGCGCT GCATCCGAAC TACGCGGGCG ATCTCGGCCT CGCCCCCAAC
CCGAAGCTGG TGGCGCGCGC CAGGGCCGCC GACCTGCTCG TGCTGCTCGG CGGGCGCCTC
GGCGAGATCC CCTCGCAGGG CTACAGCCTG CTCGACGTGC CCGGGCCGCG GACCCGCCTC
GTCCACATCC ATGCCGGCCC GGAGGAGCTG GGCCGCGTCT ACCAGCCCTT CCTCGCCATC
AACGCCTCGC CCGCGCGCAC CGCCGCCGCC CTGGCGCGGC TGCCGGCCCC GGCCCGCATC
CCGTGGCGGG AGGAGACCCG GGCCGCCCAC GCGGAGTTCC TCGCCTGGGG CGAGCGGGCG
ACGCCGCAGC CGGGCGGGGT CAATCTCGGC GAGGTGATCA TCCACCTGCG CGAGGTGCTG
CCGCGCGACG CGGTCCTGTG CAACGGCGCG GGCAATTACG CGGCCTGGAT CCACCGCTTC
TACCGGTTCC GCGGCCTCGC CTCCCACATC GCCCCGACCT CGGCCTCGAT GGGCTACGGC
GTGCCGGCCG CGGTGGCGAT GAAGCGCCTG TGGCCGCAGC GCACCGTGGT GTCGATCAAC
GGCGACGGCG ATTTCCTGAT GAACGGCCAG GAATTCGCGA CCGCCGTGCA GTACCGGCTG
CCGCTCGTGG TGATCGTGGC CGACAATGCC AGCTACGGCA CGATCCGGAT GCATCAGGAG
CGCGAATTCC CCGACCGCGT CGTCGCCACC GACCTCGTCA ACCCGGATTT CGCCGCCTAT
GCGCGGGCCT TCGGCGGGCT CGGCTGGACG GTCGAGCGCA CCGAGGACTT CCCGGCGGCG
TTCCGGGAGG CGAGCGCCTG CGGCCGGCCC GCGATCATCC ACCTCAAGAT CGCCACCGAC
GCGATCACGC CCGGCCAGAC CCTGACCCAG ATCCGCGACC GGGCGGTGGC GGGGCGCGCG
GCCTGA
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| Protein sequence | MDEARPGRTA ARVLVDQLVA NGVRHVFTVP GESFLPVLDA LRDSGIAVTT CRQEGAAAMM
AEAHGKATGM PGICFVTRGP GATNASAGLH VAQQDSTPMI LFVGQIERRF REREAFQELD
YRAVFGPMAK WATEIDDPDR VPEFVARAFA TATAGRPGPV VVALPKDMLS EATAAPLAPP
FRPVEAAPGE EDVARLADLV ASAERPLLLL GGSRWSEGAC AAIARFAEAF DLPVATSYRR
SPLFDALHPN YAGDLGLAPN PKLVARARAA DLLVLLGGRL GEIPSQGYSL LDVPGPRTRL
VHIHAGPEEL GRVYQPFLAI NASPARTAAA LARLPAPARI PWREETRAAH AEFLAWGERA
TPQPGGVNLG EVIIHLREVL PRDAVLCNGA GNYAAWIHRF YRFRGLASHI APTSASMGYG
VPAAVAMKRL WPQRTVVSIN GDGDFLMNGQ EFATAVQYRL PLVVIVADNA SYGTIRMHQE
REFPDRVVAT DLVNPDFAAY ARAFGGLGWT VERTEDFPAA FREASACGRP AIIHLKIATD
AITPGQTLTQ IRDRAVAGRA A
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