| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6493 |
|---|
| Symbol | |
|---|
| ID | 6131886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7142328 |
|---|
| End bp | 7143581 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641646582 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001773185 |
|---|
| Protein GI | 170744530 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.217095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0270431 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCCT TCCTCGTCCT CCTCCTCGCC TACACGATCA GCCAGTTCGA CCGCGGCTTC
CTCGCCATGG TGGCCCCGGA TCTCGGGCGC GACCTCGGCC TCTCCGGCTC CGACCTCGCC
CTGCTCTCCT CGGCGTGGTT CGCCGCCTTC GCGCTCGCCC AGATCCCGAC CGGGTTCTGC
CTCGACCGGT TCGGGCCCCG CCGCACCGTG GCGGCCTTCC TGGCCCTGGC ATCCCTCGGG
ACCGGGGCCC TCGCGGCGGC GGGGGGCTTC GCCGGGGCGC TCGCCGGCAT GGCGCTGATC
GGCTTCGGCT GCGCCCCGGC GCTGATGGGG AGCCTCTACG TCTTCGGCCG GCTCTACCCG
CCCGAGCGCT TCGCCATGCT GTCATCGCTG ATGATCGGCT TCGGCACGGC CGGGGATCTC
CTGGGCGCGA CCCCGCTCGC CCTCGCCTCC CGGGCGCTCG GCTGGCGGCC GATCCTGCTC
GGCCTCGCCG CCGTCACGGC CGCGTGCGCG CTCCTCGTCC TCGCCCTGAT CCGCGATCCG
GCCCGCATCC GGGATCCCAC CCGGACCGGG CTGCTGCGGG GCTTCGCGGC GATCGCGGGC
ATGCGCGCCC TGTGGCCGAT CTTCCCGGTC GTCCTCGTCA GCTACGCGGT GGTGATCGCC
ATCCGCTCGC TCTGGATCGG CGCCTATCTG GGCAGCGTGC ACGGCTTCGA CGCCCTGGCG
CGGGGCAACG GGGCGCTCGC CATGAGCGCC GCCATGGCCC TCGGCGCCAT CGGCTACGGG
CCGCTGGAGC GGCTGGTCCG CGATCCCAAG CGCACCGCCC TCGGCGGCTG CCTCGTCACC
GGCCTCGCCC TCGTGCTCCT CGGCCTCGCG GGCGCAGGCT CCGCCGCCCT GGCCGTGGCG
CTCCTCGCCG TCATCGGCGC CGCCGGCCTC AGCTACGCCA TCCTGATGGC CCATGCCCGG
CGCTTCTTCC CGGCCCACCT GCTCGGCCGG GGCGTCTCCT TCATGAACAT CCTGTTCATG
GGCGGGGCGG GCGCCGCGCA GGGTCTCTCG GCCGCCTTCG TGCTGCGGGC CGAGGGGCTC
GACCCGGCCG GGCTCTACGC GCGCCTGTTC GCCGGCTTCG GGGCGGCCCT GCTCGCCGCC
ACGGCCGTCT ACGCCTTCGC GCCGCGGGCC CCCGCGCTCA GCGCGACGCT GCCGCCTCCG
CCGCCTCCGC GGGCGTGCGC GCCCGCAGGG CGAGCGCGTG GAGGCCGCGC CTGA
|
|---|
| Protein sequence | MTAFLVLLLA YTISQFDRGF LAMVAPDLGR DLGLSGSDLA LLSSAWFAAF ALAQIPTGFC
LDRFGPRRTV AAFLALASLG TGALAAAGGF AGALAGMALI GFGCAPALMG SLYVFGRLYP
PERFAMLSSL MIGFGTAGDL LGATPLALAS RALGWRPILL GLAAVTAACA LLVLALIRDP
ARIRDPTRTG LLRGFAAIAG MRALWPIFPV VLVSYAVVIA IRSLWIGAYL GSVHGFDALA
RGNGALAMSA AMALGAIGYG PLERLVRDPK RTALGGCLVT GLALVLLGLA GAGSAALAVA
LLAVIGAAGL SYAILMAHAR RFFPAHLLGR GVSFMNILFM GGAGAAQGLS AAFVLRAEGL
DPAGLYARLF AGFGAALLAA TAVYAFAPRA PALSATLPPP PPPRACAPAG RARGGRA
|
|---|
| |