| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6486 |
|---|
| Symbol | |
|---|
| ID | 6131743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 7133636 |
|---|
| End bp | 7135102 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641646575 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001773178 |
|---|
| Protein GI | 170744523 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.158233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.579657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA CCACGCACGC AGCGACACGA TCCGCGCCGT CCCGCGACGG CGAGATCATC
GAGACCGACG TCTCCTCCCG GCTCGACCGG CTGCCCTGGG GCCGGTTCCA CACCCTGGTG
GTGCTGGCCC TCGGCATCAC CTGGATCCTC GACGGGCTGG AGGTGACGCT CGCGGGCGCG
CTCGCCGGGG CCCTGCGCGA CAGCCCGACC CTGCGCTTCA GCAATGCGGA GATCGGGCTC
GCCACGTCGA GCTACCTCGC CGGCGCCGTG CTGGGGGCGG TGGGGTTCGG CTGGCTCACC
GACCGGCTCG GGCGCAAGAA GCTGTTCTTC GTCACGCTCG CGGTCTACCT CGCGGCCACC
GCCGCCACCG GCTTCTCCTG GGACCTCTGG AGCTTCTGCC TGTTCCGGTT CCTCACGGGG
GCCGGGATCG GCGGCGAGTA CACGGCGATC AACTCGACCA TCCAGGAACT GATCCCGGCC
CGCGCCCGCG GCTGGACCGA CCTCGTCATC AACGGCTCGT TCTGGCTCGG CGCCGTGCTG
GGGGCGGGGG CCTCCCTGAT CGTGCTCGAT CCCTCCCTGT TCGGCCCCGA TCACGGCTGG
CGGGCGGCCT TCCTGCTCGG CGCGGCGCTC GGCCTCGTCA TCCTGCTCCT GCGCACCTGG
ATCCCCGAGA GCCCGCGCTG GCTGATGACC CATGGCCGCG CCGCCGAGGC CGAGGCCGTG
GTGGCCGGGA TCGAGGCGCG GTTCCGCGCC GAGGGGCACG TTCTGAGCGA GGGGCCGTTC
CGGACGGCGC GCCTGCGCCA GCGCCGGCAC ACGCCGCTCT CCGAGGTCTT CCGGACGCTC
GCCCGCTATC GCCGGCGCGC GGGGGTCGGG CTCGCCCTGA TGTCCGCCCA GGCCTTCTTC
TACAACGCGA TCTTCTTCAC CTACGGGTTG ATCCTGATCG ACTTCTACAA GGTGCCGGCC
GGGGCGGTCG GCTGGTACAT CCTGCCCTTC GCGGCCGGCA ACTTCTTCGG GCCGGTGGTG
CTCGGGCGGC TGTTCGACAC GCTCGGCCGC AAGCCGATGA TCGCGGCGAC CTACGGGATC
TCGGGGGTGC TGCTCGCCCT GAGCGGGGTG CTGTTCCAGC AGGAGGCGCT GACCGCGACC
ACGCTCACGC TGAGCTGGAT GACCGTGTTC TTCTTCGCCT CGGCGGCGGC GAGTTCGGCC
TACCTGACCG TCAGCGAGGT GTTTCCCCTG GAGATCCGGG CGCTCGCCAT CGCGGTGTTC
TACGCCGTCG GCACCGGGAT CGGGGCGGCG GGGCCGGCCC TGTTCGGGGT GCTGATCGAG
GGGCAGTCCC GGTCGGCGAT CCTCGGCGGC TACCTCGCGG CCTCCGCCCT GATGATCGCG
GCCGGGATCG TCGCGGGGAT CTGGGGCGTC GCGGCGGAGC GGCGCTCGCT GGAGGAGGTC
GCGACCCCGC TCGCCGCGGC GGAGTAG
|
|---|
| Protein sequence | MPMTTHAATR SAPSRDGEII ETDVSSRLDR LPWGRFHTLV VLALGITWIL DGLEVTLAGA
LAGALRDSPT LRFSNAEIGL ATSSYLAGAV LGAVGFGWLT DRLGRKKLFF VTLAVYLAAT
AATGFSWDLW SFCLFRFLTG AGIGGEYTAI NSTIQELIPA RARGWTDLVI NGSFWLGAVL
GAGASLIVLD PSLFGPDHGW RAAFLLGAAL GLVILLLRTW IPESPRWLMT HGRAAEAEAV
VAGIEARFRA EGHVLSEGPF RTARLRQRRH TPLSEVFRTL ARYRRRAGVG LALMSAQAFF
YNAIFFTYGL ILIDFYKVPA GAVGWYILPF AAGNFFGPVV LGRLFDTLGR KPMIAATYGI
SGVLLALSGV LFQQEALTAT TLTLSWMTVF FFASAAASSA YLTVSEVFPL EIRALAIAVF
YAVGTGIGAA GPALFGVLIE GQSRSAILGG YLAASALMIA AGIVAGIWGV AAERRSLEEV
ATPLAAAE
|
|---|
| |