Gene M446_6449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6449 
Symbol 
ID6129771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7095761 
End bp7096480 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content75% 
IMG OID641646539 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001773142 
Protein GI170744487 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.983426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTG ACGAGACGAT CCCGGCAGCC GCGGATCCCG GATTGGCCGG GGACGTTCCG 
GCCGACACGC GCCCGCGGCT GCCCCGGTTC GTGCACGCGG CGCTGGGCAC GCAGCTGCGG
GCCGCCTACG CGGCGGTCAT GGGCGGGCCG CAGCCTCAGG CTCTGCTCGA CCTGATCGCG
CGCCTGGACG CCGCCCAGGC CGCGCGACCC GCATCGACGT TCCGCGAGGA TCTGCTCGGG
GCCGTTCCGG CGCTGCGCGC CTACGCCCTG TCGCTGACCA TCCTGCGCGC CGAGGCCGAT
GACCTCGTGC AGGAGACGCT GCTGCGGGCC TGGCAGAACC AGGACCGCTT CGCGCCCGGC
ACCAACCTGA AGGCGTGGCT GTTCACGATC CTGCGCAACC AGTTCTACAC TGCGGCGCGC
AAGCGCCGGC GCGACGTGGA GGACGCGGAC GGCGAGCAGG CCGCCCGCAT GGTCGCGCTG
CCCGACCAGG AGGACGGCAT CGCGCTGCAG GACGTGTGGA TGCGGCTGAG CCAGCTGCCG
GCGCCGCAGC GGGAGGCCCT GCTGCTGGTG GCCGCGCAGG GCCTGACCTA CGAGGCGGTG
GCGGAGCTGA TGGGCTGCCG GGTCGGCACG GCGAAGAGCC GCGTCAACCG CGCCCGGGCG
GCGCTGGCGC AGGCCCTCGG CTACGAGGGC GGCCGGTCGG GCCGGATGCT CACGTCGTGA
 
Protein sequence
MAPDETIPAA ADPGLAGDVP ADTRPRLPRF VHAALGTQLR AAYAAVMGGP QPQALLDLIA 
RLDAAQAARP ASTFREDLLG AVPALRAYAL SLTILRAEAD DLVQETLLRA WQNQDRFAPG
TNLKAWLFTI LRNQFYTAAR KRRRDVEDAD GEQAARMVAL PDQEDGIALQ DVWMRLSQLP
APQREALLLV AAQGLTYEAV AELMGCRVGT AKSRVNRARA ALAQALGYEG GRSGRMLTS