Gene M446_6441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6441 
Symbol 
ID6129825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7080256 
End bp7086069 
Gene Length5814 bp 
Protein Length1937 aa 
Translation table11 
GC content68% 
IMG OID641646531 
ProductGAF sensor hybrid histidine kinase 
Protein accessionYP_001773134 
Protein GI170744479 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAG CGACCGCCCA GCTCGAGCCG AAGCTTCTCC TGAAGACCCT GCGCGCCTTT 
CGAAAGGGCG ACTTCTCGGT GCGGCTGCCC CTCGATCTCA CGGGGATCGA CGGCGAGATC
GCCGAGGCGC TCAACGACGT CGTGGAGCTG AACCAGAGCC TCGCCCGCGA GCTGGACCGC
GTGGCGCGCA AGGTCGGCAA GGACGGACGC ATCGCGGAGC GCGGCAAGCT GCCGACGGCC
ACCGGCGGAT GGGTCGAGTG CATCGACTCG GTCAACGCGA TGATCGGCGA CCTCGTCCAG
CCCACCACCG AGGTGGCGCG GGTCATCGGC GCCGTCGCGA AGGGCGACCT CGGCCAGACG
ATGCAGCTCG AGATCGAGGG GAGGCCGCTC CAGGGCGAGT TCCTGCGGAT CGGCAAGGTC
GTCAACACGA TGGTGGACCA GCTGAACTCC TTCGCCAGCG AGGTGACCCG GGTCGCCCGC
GAGGTCGGCT CGGAGGGCAA GCTCGGCGGC CAGGCCCAGG TGAAGGGCGT CGGCGGGACC
TGGAAGGACC TCACCGAGAA CGTGAACCTG ATGGCCGCCA ACCTGACCGG TCAGGTGCGC
AACATCGCCG AGGTCACGAC CGCGGTCGCC AACGGCGACC TCTCGAAGAA GATCACCGTC
GACGTCAAGG GCGAGATCCT CGACCTCAAG TCGACGTTCA ACACGATGGT GGACCAGCTG
AACTCCTTCG CCTCGGAGGT GACCCGCGTC GCCAAGGAGG TGGGCTCGGA GGGCAAGCTC
GGCGGTCAGG CCCAGGTGAG GGGCGTCGGC GGCGTCTGGA AGGACCTCAC CGACAACGTC
AACATGATGG CGGCGAACCT GACCGGTCAG GTGCGCAACA TCGCCGAGGT CACCACGGCC
GTGGCCCGCG GCGACCTCTC GAAGAAGATC ACGGTCGACG TCAAGGGCGA GATCCTGGAG
CTGAAATCGA CCATCAATAC GATGGTGGAC CAGCTGAACT CCTTCGCCTC GGAAGTGACC
CGGGTCGCCC GCGAGGTCGG CACCGAGGGC AAGCTCGGCG GCCAGGCGCA GGTCGAGGGT
GTCGGCGGGA CCTGGAAGGA CCTCACCGAC AACGTCAACA TGATGGCCGC CAACCTGACC
GGTCAGGTGC GCAACATCGC CGACGTGACC ACGGCGGTGG CGAACGGCGA CCTGTCGAAG
AAGATCACCG TCGACGTCAA GGGCGAGATC CTGGAGCTGA AGAACACCAT CAACACGATG
GTGGACCAGC TGAACTCCTT CGCCAGCGAG GTGACCCGCG TCGCCCGCGA GGTCGGCTCG
GAGGGCAAGC TCGGCGGCCA GGCGCGCGTG GAGGGGGTCG CCGGCACCTG GGCCGACCTG
ACCGACAACG TGAACCTGAT GGCCGCGAAC CTCACCGGTC AGGTGCGCAA CATCGCCGAC
GTGACCACGG CGGTGGCCAA CGGCGACCTC TCGAAGAAGA TCACCGTCGA CGTCAAGGGC
GAGATCCTGG AGCTGAAGAA CACCATCAAC ACGATGGTGG ACCAGCTGAA CTCCTTCGCC
AGCGAGGTGA CCCGGGTCGC CCGCGAGGTC GGCTCGGAGG GCAAGCTCGG CGGCCAGGCG
CAGGTGCGCG GCGTGGCGGG CACCTGGGCC GACCTGACCG ACAACGTGAA CCTGATGGCG
GCCAACCTGA CCGGTCAGGT GCGCAACATC GCCGAGGTCA CGACCGCGGT CGCCAACGGC
GACCTCTCGA AGAAGATCAC CGTCGACGTC AAGGGCGAGA TCCTGGAGCT GAAATCGACC
ATCAACACGA TGGTGGACCA GCTGAACTCC TTCGCCTCGG AGGTGACCCG GGTCGCCCGC
GAGGTCGGCA CCGAGGGCAA GCTCGGGGGG CAGGCTCAGG TGAAGGGCGT CGGCGGCGTC
TGGAAGGGGC TGACCGACAA CGTCAACATG ATGGCGGCGA ACCTGACCGG TCAGGTGCGC
AACATCGCCG AGGTCACGAC CGCGGTCGCC AACGGCGACC TCTCGAAGAA GATCACCGTC
GCCGTCGAGG GCGAGATCCT GGAGCTGAAA TCGACCATCA ACACGATGGT GGACCAGCTG
AACTCCTTCG CCTCGGAGGT GACCCGGGTC GCCCGCGAGG TCGGCATCGA GGGCAAGCTC
GGCGGCCAGG CTCAGGTGCG CGGCGTCGGC GGGACCTGGA AGGACCTCAC CGACAACGTC
AACATGATGG CGGCGAACCT GACCGGTCAG GTGCGCAACA TCGCCGACGT GACCACGGCG
GTGGCGAACG GCGACCTCTC CAAGAAGATC ACCGTCGACG TGCGCGGCGA GATCCTGGAG
CTGAAATCGA CCATCAACAC GATGGTGGAC CAGCTGAACT CCTTCGCCTC GGAGGTGACG
CGGGTCGCCC GCGAGGTCGG CTCGGAGGGC AAGCTCGGCG GCCAGGCCCA GGTGAAGGGC
GTCGGCGGGA CCTGGAAGGA TCTCACCGAC AACGTCAACA TGATGGCCGC CAACCTGACC
GGGCAGGTGC GGGGCATCGC CAGCGTGGTG ACCGCGGTCG CGCAGGGCGA TCTCAAGCGC
AAGCTCACGG TCGACGCCAA GGGCGAGATC GCGGCCCTGG CCGACACCGT CAACGAGATG
ATCGAGACGC TCGCCACCTT CGCCGATCAG GTGACGAACG TCGCGCGCGA GGTGGGCGTC
GAGGGCAAGC TCGGCGGCCA GGCGCGGGTG CCGGGGGCGG CCGGCCTGTG GCGCGACCTC
ACCGACAACG TGAACCAGCT CGCCGCCAAC CTGACCACCC AGGTGCGCGC CATCGCCGAC
GTGGCCACGG CGGTGACCAA GGGCGACCTC GCCCGCTCGA TCTCGGTCGA GGCCTCCGGC
GAGGTCGCCT CGCTGAAGGA CACGATCAAC GAGATGATCC GCAACCTGCG CGACACGACG
CTCAAGAATG CGGAGCAGGA TTGGCTGAAG ACCAACCTCG CCAAGTTCAC CCGCATGCTG
CAGGGCGAGC GCGACCTCGC CACGGTCTCG AACCTGATCC TGTCCGAGAT CGCGCCGCTG
GTGAACGCTC AGCGCGGGGT GTTCTACATG ATGGAGAGCG ACGGCGCGGA GCCCGTGCTG
GACCTCGTGG CGAGCTACGC CTTCACCGAG CGCAAGAACC TGTCGAACCG CTACCGCCTG
CGCCAGGGGC TGGTCGGGCA ATGCGCCTAC GAGAAGAAGC GCATCCTGCT CACCAACGTG
CCGGGCGACT ACATCACGAT CGGCTCCGCC CTCGGCGAGG CGGCCCCGAT CAACATCATC
GTGCTGCCGG TCCTGTTCGA GCAGGAGGTC CGGGCCGTGA TCGAGCTCGC CTCCTTCAGC
CGCTTCAGCG AGACGCATCA ATCCTTCCTG GACCAGCTCA CCGAGTCGAT CGGCATCGTG
CTGAACACGA TCGCGGCGAA CATGCGGACC GAGGGCCTGC TGGCGCAGTC GCAATTGCTG
ACCAGCGAGC TGCAGAGCCA GCAGGAGGAG CTGAAGAAGA CCAACGACCG CCTCGAGACC
CAGGCCGCTT CGCTGCAGCA ATCCGAGGAC CTGCTCAAGA GCCAGCGCGA GCGCCTGCAG
CAGACCAACG AGGAGCTCGA GGAGAAGGCG CGTCTCCTGG AGATCCAGAA GAAGGAGGTC
GAGGGCAAGA ACCGCGAGGT CTCGATCGCC AAGATCTCCC TCGAGGAGAA GGCCGAGCAG
CTCTCGCTGA CCTCCCGCTA CAAGTCCCAG TTCCTGGCGA ACATGAGCCA TGAGCTGCGC
ACGCCGCTGA ACAGCCTGCT CATTCTCTCG AAGCTGCTGA GCGAGAACAG GGAAGGGAAC
CTGAGCGACA AGCAGCGGGA ATTCGCCAGG ACCATCAACG CGGCCGGTTC CGACCTGCTG
TCCCTGATCA ACGACATCCT CGACCTGTCC AAGATCGAGT CCGGGACGGT CTCCCTCGAA
CTCGGCGACG TCGACCTCCA GGATCTCGCC GGCCACCTCG ACCGCAGCTT CCGCCCGCTC
GCCGAGGAGC GCCAGCTCGC CTTCACGATC GACGTCGCCC CCGCCCTGCC GCGGCTCGTG
CGGACGGACT CGAAGCGGCT GCAGCAGGTG CTGCGCAACC TCCTGTCCAA CGCCTTCAAG
TTCACCGAGA AGGGCAGCGT CGCGCTCAAG CTCGGCTCGG CCGAGGGCTC GCCGCTGCGC
GCGGGCAGCC AGTGGATGGC CTTCACGGTG ACCGATACCG GCATCGGCAT CCCCGAGGAC
AAGCAGCGCA TCATCTTCGA GGCGTTCCAG CAGGCGGACG GCACCACCAG CCGCAAGTAC
GGCGGCACCG GCCTCGGCCT CGCCATCAGC CGCGAGATCG CCCGGCTGCT CGGGGGCGAG
ATCGTCCTGT CGAGCCGGCT CGGGCAGGGC AGCACCTTCA CGCTCTTCCT GCCGCTCGAG
CCGCCGCTGG CCGCGGCCGC GGGCCGCCCG GCCGAGGCCA AGGAGGGCAA CGGGGCGTCG
CAGCCGGCGA TCCGGCCGGC CTCCGCCGCC ATGGCGCTGT CCTCCTCCGC GGACGACCGC
CACGCGATCG CGGCGGGCGA CCACATCGTG CTCATCGTCG AGGACGACGC GATGTTCGCG
TCGGTCCTGC TCGAACTGGC CCGCGAGCGG GGCTTCAAGG GGCTGATCGC CCAGGACGGG
GCGGCGGCGC TCGCGCTCGC CCATCGCTAC AAGCCGCACG CGATCACCCT GGACATCGGC
CTGCCGGACA TGGACGGCTG GGCGCTCCTC GACCACCTGA AGAACGACGT CCGCACCCGT
CACATCCCGA TCCACGTCAT CTCGGTCAAC GACGAGAAGA AGCGCGGGCT GCGGGCCGGG
GCCTTCGGCT TCCTGGAGAA GCCCGTCGAC CGCGAGGGCC TGCTCAGGGC GCTGGAACGG
TCGAAGGAGT TCATCACCCG GCCGGTGCGC AGCCTGCTCC TGGTCGAGGA CGACGACAAT
CAGCGCGCGA GCATCACCGC CCTGCTGAGC GAGGAGGACG TCAAGGTGTT CAGCGTCAGC
ACGGCCGCCG CCGCGCTGGA GGCGGTGGCG GGCGGGCGCT TCGACTGCGC GATCGTCGAT
CTCGGGCTGC CCGATCTCGG CGGCTCCGAG CTGATCGAGC AGATCCGCGC CACCCCGGAC
GGCGAGGAGC TCCCGATCAT CGTCTATACC GGCCGTGAGT TGACCGAGGC CGAGGAGCAG
CAGCTCAAGC AGACCGCCTC GACCATCATC CTGAAGGACA GCCACTCCTC CGAGAGGCTG
CTCGACGAGA CCGCCCTGTT CCTGCACCGG GCGATCGACG GCGGTTCCGG CGAGCGCCAG
GTCGGGAGCG AGCGACGGGA TCCGGTGTCG CTGCAGGGCT GCCGCATCCT CCTGGTCGAC
GACGATGTGC GCAACATCTT CTCCCTCACG AGCGCGCTGG AGCTGCACGG CCTCGACGTC
CTCTTCGCGG AGAACGGGCG CGACGGGATC GCGCTGCTCA AGGCCAATCC GAGCATCGAC
GCCATGCTGG TCGACATCAT GATGCCGGAG ATGGACGGGT ACGAGACCAT GCGGGAGATC
CGCCGGGACG AGCGCTTCCG CGCCCTGCCG CTGATCGCCG TGACCGCCAA GGCCATGAAG
GGCGACCGCG AGAAGTGCAT GGAGGCCGGC GCCTCCGACT ACGTCTCGAA GCCCGTCGAC
CTGGATCAGC TGCTCGCGGT CCTGCGCGTG CAGCTCGAGC AGCGCCGCCA CGCCGCGGGC
GGCGCTCCGC ACCGGGGCAA CGGCCGCGCG GACACCTCCG GGATCGCCCC ATGA
 
Protein sequence
MTAATAQLEP KLLLKTLRAF RKGDFSVRLP LDLTGIDGEI AEALNDVVEL NQSLARELDR 
VARKVGKDGR IAERGKLPTA TGGWVECIDS VNAMIGDLVQ PTTEVARVIG AVAKGDLGQT
MQLEIEGRPL QGEFLRIGKV VNTMVDQLNS FASEVTRVAR EVGSEGKLGG QAQVKGVGGT
WKDLTENVNL MAANLTGQVR NIAEVTTAVA NGDLSKKITV DVKGEILDLK STFNTMVDQL
NSFASEVTRV AKEVGSEGKL GGQAQVRGVG GVWKDLTDNV NMMAANLTGQ VRNIAEVTTA
VARGDLSKKI TVDVKGEILE LKSTINTMVD QLNSFASEVT RVAREVGTEG KLGGQAQVEG
VGGTWKDLTD NVNMMAANLT GQVRNIADVT TAVANGDLSK KITVDVKGEI LELKNTINTM
VDQLNSFASE VTRVAREVGS EGKLGGQARV EGVAGTWADL TDNVNLMAAN LTGQVRNIAD
VTTAVANGDL SKKITVDVKG EILELKNTIN TMVDQLNSFA SEVTRVAREV GSEGKLGGQA
QVRGVAGTWA DLTDNVNLMA ANLTGQVRNI AEVTTAVANG DLSKKITVDV KGEILELKST
INTMVDQLNS FASEVTRVAR EVGTEGKLGG QAQVKGVGGV WKGLTDNVNM MAANLTGQVR
NIAEVTTAVA NGDLSKKITV AVEGEILELK STINTMVDQL NSFASEVTRV AREVGIEGKL
GGQAQVRGVG GTWKDLTDNV NMMAANLTGQ VRNIADVTTA VANGDLSKKI TVDVRGEILE
LKSTINTMVD QLNSFASEVT RVAREVGSEG KLGGQAQVKG VGGTWKDLTD NVNMMAANLT
GQVRGIASVV TAVAQGDLKR KLTVDAKGEI AALADTVNEM IETLATFADQ VTNVAREVGV
EGKLGGQARV PGAAGLWRDL TDNVNQLAAN LTTQVRAIAD VATAVTKGDL ARSISVEASG
EVASLKDTIN EMIRNLRDTT LKNAEQDWLK TNLAKFTRML QGERDLATVS NLILSEIAPL
VNAQRGVFYM MESDGAEPVL DLVASYAFTE RKNLSNRYRL RQGLVGQCAY EKKRILLTNV
PGDYITIGSA LGEAAPINII VLPVLFEQEV RAVIELASFS RFSETHQSFL DQLTESIGIV
LNTIAANMRT EGLLAQSQLL TSELQSQQEE LKKTNDRLET QAASLQQSED LLKSQRERLQ
QTNEELEEKA RLLEIQKKEV EGKNREVSIA KISLEEKAEQ LSLTSRYKSQ FLANMSHELR
TPLNSLLILS KLLSENREGN LSDKQREFAR TINAAGSDLL SLINDILDLS KIESGTVSLE
LGDVDLQDLA GHLDRSFRPL AEERQLAFTI DVAPALPRLV RTDSKRLQQV LRNLLSNAFK
FTEKGSVALK LGSAEGSPLR AGSQWMAFTV TDTGIGIPED KQRIIFEAFQ QADGTTSRKY
GGTGLGLAIS REIARLLGGE IVLSSRLGQG STFTLFLPLE PPLAAAAGRP AEAKEGNGAS
QPAIRPASAA MALSSSADDR HAIAAGDHIV LIVEDDAMFA SVLLELARER GFKGLIAQDG
AAALALAHRY KPHAITLDIG LPDMDGWALL DHLKNDVRTR HIPIHVISVN DEKKRGLRAG
AFGFLEKPVD REGLLRALER SKEFITRPVR SLLLVEDDDN QRASITALLS EEDVKVFSVS
TAAAALEAVA GGRFDCAIVD LGLPDLGGSE LIEQIRATPD GEELPIIVYT GRELTEAEEQ
QLKQTASTII LKDSHSSERL LDETALFLHR AIDGGSGERQ VGSERRDPVS LQGCRILLVD
DDVRNIFSLT SALELHGLDV LFAENGRDGI ALLKANPSID AMLVDIMMPE MDGYETMREI
RRDERFRALP LIAVTAKAMK GDREKCMEAG ASDYVSKPVD LDQLLAVLRV QLEQRRHAAG
GAPHRGNGRA DTSGIAP