Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6421 |
Symbol | |
ID | 6135680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 7052932 |
End bp | 7054473 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641646512 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001773115 |
Protein GI | 170744460 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCA TCGCGTTTGC TCTTGTTGCC GGGTTGGCCG CTCAAGCTGC AACCGCCCAG GTACGAACTC CAGAGTTCAC CAGGGCAGAA TTCGTATTCA ACGAAGAGCA CAACCTTCGA TCCCGTGTTA TTGCCCAGGT TCTGTTAATA GCCACCGGCC ATCAAACGTC CGTTCCAACG GAAAACCTCG GTCTGCGCAC TTTTGAGGCG ATCAAGCGGT TTCAAGAACA GAACGGTATC TGGCCGGACG GAGTCCTCAA CAAGTCCACT CACGACCGGC TGTTCGCAAC CGCGGCACCG ATGATGACAA TGTGGGACTT CAAGTTGCTT GAGCATCCGT CGCGAGGCCG CCCCATCTGG GTGCCTCAGG GCTTGTCTTT GCGCCCGCTC ACAAATAAGA GTGGCCTTGC GTTTGAAGAC TCACTTGCCC GCCTAATCGT CAAATACAAC TACTTCCCAT CGATCAACGT CGCTCTCGTT TATTCAGACA CGTTAGAACG CAAACGGCGC AATCGGTACA CAATCAATTA CAGCGTCATT AAAGACGAAT GGTTTGTTAT ATCAGCCACT TCCTCAAGCG GTAAAGACGA ATATCTTCGC TACCACCAAG ACGGAGATGG GGTCCTCGGC TTTTCACTGT TCTGGGACAA CGCAAAGGGT AATGTCGGCG GTGAACGCAT CGCAATCTTG ATGTCAGCTT CGCTTGGCTC CGTGATGAAC GGGCGTCCTA TGGTCGAGCC GCCAGGGGCG TCGCAGGCGG CCGCTCGAGT CGCCGCGACA CCTCCCTTGC AGGTTCCGGT TCCCGCACAG CCCGTAGCAC GCGAGAATGC GCCCGTTCCC TCGGCGTTGC CTCCCGTCGC CACCGCGCCT CCCGCACCTG CACCTCCTGC GGCACCGAAG GCTGAGGAGA ACGGCATCTC AACGGGTTCA GGCTTTTTCG TAGACACCAA TGGCAACTTC ATCACGAATG CCCATGTGAT CAAGGATTGC AAGTTCGTCG TGGTGAAACT GAACGATAGC AAATCTCCGC ACAATGCGCG AGTTGCTGCG ACAGACAGCA GCAATGATCT TGCTCTCCTC GCAATCGAAG ATGCCAAGGG AGGCAGATTT GCGCCGATTA GAACGGGCAC TAGGCTAGGA GAGTCTGTCG CTGCTTTTGG GTATCCTCAT GCGGACATCC TGGCGAGCTC TGGCAATTTC ACACTGGGAA ACATAACCGC CCTATCTGGC TTAGGTGATG ATAGCCGATA CTACCAAATC TCTACTCCTG TTCAGCAGGG TAACTCTGGT GGCCCACTCC TAGACAGTTA TGGCAACGCT GTGGGGGTCG TTGCGGCGAA GCTGAACGTG CTCAAGGTGG CGCTTGCCTC TGGCGATTTC CCACAGAATA TCAACTTTGC GATCAAGAGC ACGATGCTCG CGACGTTCCT AGAGTCGAAC CAGATCGCAA TCCAACCGGG CACGACGACA GGAGCCAAGC TTGATCCCGC AGACCTTGCG GATTCCGCCA AGGCGATGAG CGGGTTCGTA GCCTGCCAGT AA
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Protein sequence | MRRIAFALVA GLAAQAATAQ VRTPEFTRAE FVFNEEHNLR SRVIAQVLLI ATGHQTSVPT ENLGLRTFEA IKRFQEQNGI WPDGVLNKST HDRLFATAAP MMTMWDFKLL EHPSRGRPIW VPQGLSLRPL TNKSGLAFED SLARLIVKYN YFPSINVALV YSDTLERKRR NRYTINYSVI KDEWFVISAT SSSGKDEYLR YHQDGDGVLG FSLFWDNAKG NVGGERIAIL MSASLGSVMN GRPMVEPPGA SQAAARVAAT PPLQVPVPAQ PVARENAPVP SALPPVATAP PAPAPPAAPK AEENGISTGS GFFVDTNGNF ITNAHVIKDC KFVVVKLNDS KSPHNARVAA TDSSNDLALL AIEDAKGGRF APIRTGTRLG ESVAAFGYPH ADILASSGNF TLGNITALSG LGDDSRYYQI STPVQQGNSG GPLLDSYGNA VGVVAAKLNV LKVALASGDF PQNINFAIKS TMLATFLESN QIAIQPGTTT GAKLDPADLA DSAKAMSGFV ACQ
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