Gene M446_6380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6380 
Symbol 
ID6131470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7006518 
End bp7007474 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content73% 
IMG OID641646474 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001773078 
Protein GI170744423 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.879791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC CCCCGCGCCG CCCCGATGCC CGCCGCGATG CCCGTCCGGG GCGGCGCCTG 
CGCGACGCCC TCGCCCGGGC GGCCGTGCCG GCCCTGCCCT TCGCCTGGCT TCTCGCGTTC
TTCGGGCTGC CCTTCCTGAT CGTCCTCAAG ATCAGCCTCT CGGACCCCGC CACCGCGCTG
CCGCCCTACA CCCCGGTGCT CGACTGGGAC GCCGGGGTGG CCGGCTGGTC CGACTTCCTC
GCCGCCCTCG ACTTCGAGAA TTACCGCACC CTCGCGGCCG ACCCGCTCTA CCTCGACGCG
GCGCTGACCT CCCTGTGGAT CGCGCTCGCC GCGACGCTCC TCCTCGCCCT CGTCGGCTAC
CCGATCGCCT ACGGCATGGC GCGGGCGCCC CGGCGCCTGC AGCCGCTCCT CGTCGCCCTG
ATGGTGATCC CGTTCTGGAC GAGCTTCCTG ATCCGGGTCT ACGCCTGGAT CGCGATCCTG
AAGGCGGACG GCTTCCTCAA CCAGGCCCTG CTGGCGCTGG GCCTCGTCGC CCAGCCGCTG
ACGATCCTGA ACACGCCGGC CGCGATCCTG ATCGGCATCG TCTACGCCTA CCTGCCCTTC
ATGGTGCTGC CGCTCTACGC GGTGCTGGAG CGCCTCGACC GCGGCCTGAT CGAGGCGGCC
CGCGACCTCG GGGCGAGCCG GGAAGCGGCC TTCCTGACCG TGACCCTGCC GCTCTCGGCC
CCGGGCCTCG CGGCCGGGGC GCTGCTCTGC TTCATCCCGA TCATCGGCGA GTTCATCGTC
CCGGACCTGC TCGGCGGCGC CGACACGCTG ATGCTCGGGC GGGTCCTGTG GAGCGAGTTC
TTCTCGAACC GCGACTGGCC CCTCGCCGCG GCGGTGGCCG TGGTGATGCT GCTGATCGTG
GCCGGGCCGC TGGTGCTGTT CCGCGAGGCC GAGGCCCGCC AGATGGAGCG ACCGTGA
 
Protein sequence
MSRPPRRPDA RRDARPGRRL RDALARAAVP ALPFAWLLAF FGLPFLIVLK ISLSDPATAL 
PPYTPVLDWD AGVAGWSDFL AALDFENYRT LAADPLYLDA ALTSLWIALA ATLLLALVGY
PIAYGMARAP RRLQPLLVAL MVIPFWTSFL IRVYAWIAIL KADGFLNQAL LALGLVAQPL
TILNTPAAIL IGIVYAYLPF MVLPLYAVLE RLDRGLIEAA RDLGASREAA FLTVTLPLSA
PGLAAGALLC FIPIIGEFIV PDLLGGADTL MLGRVLWSEF FSNRDWPLAA AVAVVMLLIV
AGPLVLFREA EARQMERP