| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6350 |
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| Symbol | |
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| ID | 6134921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 6977481 |
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| End bp | 6978365 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641646444 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_001773048 |
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| Protein GI | 170744393 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0219835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.177291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CGACCGAGGC GCGCTCCGGC AAGTCGCACC GCGACGAGAA CTTTCCGGTC
GCGTCGCACC TGATCCATCC GCGCCACCGG CGGCCGATCC TGGCCTTCTA CGATTTCGTG
CGCGCGGGCG ACGACGTCGC CGACAATGCG GGCCTCGACC CGTCCCGCAA GGTGGCGCTC
CTCGACGGGC TCGCGGCGGC GCTGACCGGC ACCGGCCCGG ACGATCCCGA GGCCGCGCCC
CTGCGCGCGG CGCTGGCCGA GCGCGGCCTC TCCCCGCGCC ACGCCCTCGA CTTGCTCGAC
GCCTTCCGGA TGGACGCGCG CAAGTCGCGC TACGCCAGCT TCGACGAGCT GATGCACTAT
TGCCGCTACT CGGCGATGCC GGTCGGCCGC TTCGTCCTCG ACGTGCACGG CGAGGATCCG
GCCGCGACCT GGGCGGCCTC GGACGCGATC TGCGCGGCGC TGCAGATCAT CAACCACCTG
CAGGATTGCG GGAAGGACTT CTCGCAGCTC GACCGGGTCT ACCTGCCGGA GGACCTGATG
GCGACGCACG GGGTCGCGGC GGGCGACCTC GGCGCGCCGC GGGCCTCGCC GGGCCTGCGG
GCGGTGATCG GCACGCTGGC CCACCGCTGC CTCGACCTCC TGCACGAGGG ACGGGCCCTG
CCCGACCTGA TCGAGGACAC CCGGCTGGCG ATGGAGATCG CCGCCATCCA CCGCCTCGCC
GTGATGCTGG CCCGCGGCCT CACGGCCCGC GACCCGCTGA GCCAGCGCGT CCATCACGGC
AAGGCCGCCT TCGCGCTGAT CGCCCTCGGG GCGGCCGGCA CCGCCCTCGC CCGCCGGCCC
TTCCGGCGGC ACCTCGCCCC CTCCGTCCGG GGAGCCCGCC CGTGA
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| Protein sequence | MTTATEARSG KSHRDENFPV ASHLIHPRHR RPILAFYDFV RAGDDVADNA GLDPSRKVAL
LDGLAAALTG TGPDDPEAAP LRAALAERGL SPRHALDLLD AFRMDARKSR YASFDELMHY
CRYSAMPVGR FVLDVHGEDP AATWAASDAI CAALQIINHL QDCGKDFSQL DRVYLPEDLM
ATHGVAAGDL GAPRASPGLR AVIGTLAHRC LDLLHEGRAL PDLIEDTRLA MEIAAIHRLA
VMLARGLTAR DPLSQRVHHG KAAFALIALG AAGTALARRP FRRHLAPSVR GARP
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