| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6342 |
|---|
| Symbol | |
|---|
| ID | 6134913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6968031 |
|---|
| End bp | 6969185 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641646437 |
|---|
| Product | hopanoid biosynthesis associated radical SAM protein HpnH |
|---|
| Protein accession | YP_001773041 |
|---|
| Protein GI | 170744386 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00364932 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGGCATCC CTCTTCGGTA CGTCGCAAAG ATCGGCGGCT ACATCCTCAA GCAGCACCTC
ACGGGCCGCA AGCGCTACCC GCTCGTGATG ATGATGGAGC CGCTGTTCCG CTGCAATCTG
GCCTGCGCCG GCTGCGGGAA GATCGATTAT CCGGACGAGA TTCTCAACAA GCGTCTGCCG
GTCGACGAGG CCCTGGAATC GGTCCGCGAG TGCGGCGCGC CGGTCGTCGT CATCGCGGGC
GGCGAGCCTC TGCTGCACAA GGACCTGCCC CAGATCGTCG AGGGCATCAT CCAGCAGAAG
AAATTCGCGA TCGTCTGCAC GAACGCTTTG CTGCTCGAGA AGAAGATCTC GCAGTACAAG
CCGAGCCCGT ACTTCACTTG GTCGATCCAT CTCGATGGCG ACAAGGAGAT GCACGACAAG
TCGGTGTGCC AGCGCGGCGT CTATGACAAG GCGGTGGCGG CGATCAAGAA GGCCAAGGAT
CTGGGCTTCC GCGTCACGAT CAACTGCACC TTCTTCAACA ACTCCGCGCC GGAGCGGATC
GCCGACTTCT TCGACAGCGT GACCCGGATG GGCATCGACG GCATCACCGT CTCGCCCGGC
TACGCCTACG AGCGCGCGCC CGACCAGCAG CACTTCCTGA ACCGGAAGGC CACCAAGGAG
CTGTTCCGCG GCGTGTTCCG CCTCGGCAAG CAGAAGGGCC GCGAGAAGTG GACCTTCCAG
CAATCGGGCC TGTTCCTTGA CTTCCTGGCG GGCAACCAGT CCTACCATTG CACGCCCTGG
GGCAACCCGA CCCGGACCGT GTTCGGCTGG CAGAAGCCCT GCTACCTGCT GGGCGAGGGC
TACGCCAAGA CCTTCAAGGA GCTGATGGAG ACGACCGACT GGGACGCCTA CGGCACCGGC
AACTACGAGA AGTGCGCCGA CTGCATGGTG CATTCCGGCT ACGAGGCGTC CTCGGTGGTC
GATTCGGTGC GCAAGCCCTG GAAGCCGCTC GTCTTCGCGC TGCGCGGCAT CCGGACCGAG
GGCGAGATGG CCTCGGAGAT CTCCCTGGAG AACCAGCGCC CGGCGGAGTT CGTCTTCTCA
CGCAACGTCG CGCAGAAGCT CTCCGAGATC CGGAACGCCG AGGCCGACGC CAAGAAGCGC
GCGACAGCGG CCTAG
|
|---|
| Protein sequence | MGIPLRYVAK IGGYILKQHL TGRKRYPLVM MMEPLFRCNL ACAGCGKIDY PDEILNKRLP
VDEALESVRE CGAPVVVIAG GEPLLHKDLP QIVEGIIQQK KFAIVCTNAL LLEKKISQYK
PSPYFTWSIH LDGDKEMHDK SVCQRGVYDK AVAAIKKAKD LGFRVTINCT FFNNSAPERI
ADFFDSVTRM GIDGITVSPG YAYERAPDQQ HFLNRKATKE LFRGVFRLGK QKGREKWTFQ
QSGLFLDFLA GNQSYHCTPW GNPTRTVFGW QKPCYLLGEG YAKTFKELME TTDWDAYGTG
NYEKCADCMV HSGYEASSVV DSVRKPWKPL VFALRGIRTE GEMASEISLE NQRPAEFVFS
RNVAQKLSEI RNAEADAKKR ATAA
|
|---|
| |