| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6341 |
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| Symbol | |
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| ID | 6134912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 6964745 |
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| End bp | 6967393 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641646436 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_001773040 |
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| Protein GI | 170744385 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.432737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00194577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGATCGAAC GGCTCGTCGC GCTCTCCGTC CGCCATCGCT GGCTGGTGCT GCTCGCCTGC
CTCGCCCTGA CGGCGGCGAG CGCGCTGACG GCGGCGCACC GCTTCCGCAT CAACACCGAC
GTCGAGCGCC TGATCGCGCC CGACGTGGGC TGGCGTCAGG ACGAGATCCA GTTCGAGAAG
GCCTTCCCCC AGCGCAGCAA CCTGCTGGTG GCGGTGATCG ACGCGCGCAC CCCCGAGCAG
GCGGACGAGG CGGCGACGCG CCTCGCCGAG GCCCTGTCGC AGCACAGGAG CCGCCTGCCG
GTGGTCTACC GGCCCGACGG CGGTCCCTTC TTCGACAAGA ACGGCTTCCT GCTGATGCCG
CAGAAGGAGC TGGAGCAGAC CACCGAGCGG CTGGTGCAGC AGCAGGGGCT GCTCGGGCCG
CTCGCGGCGG ACCCGTCGCT GCGCGGCATC CTGCAGGCGA TGGGCCTGGG CGCGCAGGGC
GTGAAGGGCG GCCAGGCCAA GATCGAGGAC CTGACGAGCC CGCTCGGCCA GCTGCGCGAC
ACGTTCGAGA AGGCGCTGAG GGGCGAGCCG GCCCGCCTGT CCTGGCAGCT CCTGCTCTCG
GGCGGCAAGG CCGAGACGGG GGATCTGCGC CGCTTCGTGA TCACCCAGCC GCGCCTGGAC
TTCGACGAAT TGCAGCCGGG CGCCGACGCC AGCGCGCTGA TCCGCAAGAC CGCCCGCGAC
CTCCACCTCA CGCCGCAGGA CGGCGTGACG GTGCGCCTGA CCGGCCAGGT CGCGGTGGCG
GACGACGAGT TCGCCACCCT CTCGGACGAC GCCCTCCTCA ACAACTCGGT GACGGTGGGC
GCCATCGTCC TGTTCCTGTG GCTGGCGCTG CGCTCGCCGA GCCTCGTGGT CGCGGTGATC
ATCACGACCT TCGCGGGCCT CATCGTCACG GCGGCGCTCG GCCTGCTGAT GGTCGGCGAA
CTCAACCCGA TCTCGGTCGC CTTCGCGGCC CTGTTCGTCG GGCTCGGCAT CGATTTCGGC
ATCCAGTTCG CGGTGCGCTA CCGGGCCGAC CGCTTCGTGC AGCCCGACCT GGCCAAGGCG
ATCCGCTCGG CCGCCCACGG GGTCGGCTGG TCCCTGACGC TCGCCGCGGT GTCGCTGCTG
GCGGGCTTCT TCTCCTTCCT GCCGACGGAG TTCCGCGGCG TGTCCGAACT CGGCCTCATC
GCCGGCGTCG GCATGATCGT GGCCTACCTG TTCGCGCTGA CGCTGCTGCC CGCCCTGATC
GCGGTGTTCA AGCCGCGGGG CGAGAAGGAG GAGGTCGGCA CCGCCTCGCT GGCCAAGGTC
GACCACTGGA TCATCCAGAA CCGCAAGCTC GTGCTGGTGC TGACCGGGCT CGTGACCGTG
GCGGGCCTGC CGCTCCTCTA CTACCTGCCG TTCGACTCGA ACCCGATGCA CCTGCGCAGC
CCGAAGGTGG AATCGGTCGC GACCTATCTC GACCTCGCCA AGGACCCGGC CACGAGCCCC
AACACGATCG ACGTGCTGGT GCCGAACCGC GACGCGGTGC GGCCGATGGC CGAGCGCCTG
CGGGCGCTGC CGATCGTCGC GAACGTGATC GACATCGACA CCTTCGTGCC CCTGGACCAG
GACCAGAAGC TCGCGACCAT CGAGGACGCG GCGAGCGTGC TCGGCCCGGT GCTGAACCCG
CCCCGCGTGG CGCCGCCGCC GAGCGACCGG GACGTGGTCC AGGCGCTCAA ATCCGCTTCG
GGCGCCCTGC GCGGCATCGC CGGCAAGGGC GAGAGCGCGC CCGAGAAGGA GGTGCTCGCC
TTCACGGACA CGCTCGACCG CCTCGCCGAG GCCTCCCCGC AGGTGCGGGA GGCGGCCGCG
GCCGCGACCG TGCCGGACCT CAAGGGCCTT CTCGCGCGCC TGCGCGGCCT GCTCTCGCCG
GAGAAGATCA CCCTGGAGAG CCTGCCCGAG CAGATCCGCT CGGAATGGAT CGCCAAGGAC
GGGCGCGCCC GGCTGGAGGT GCAGCCCAAG GGCAACTCGA ACGACAATAC GGTGCTGCGC
CGCTTCTCCA AGGAGGTGCT GAGCGTGGCG CCGCACGCGA CCGGCGCGCC GATCGCCACG
ACGCGGTCGA GCAGCACGAT CCTGGGCGCC TTCATCGAGG CGGGCGCCCT CGCCCTGCTG
TCGATCTTCG TGATCCTATC GGTCGCGCTG CGCCGCCCGT GGGACGTGGC GATGGCGCTC
GGCCCGCTGG TGCTCGCGAC CCTGTGGACG CTGGAGGCGC TCTACCTGAT CGGGATGCCG
CTCAACTTCG CCAACATTAT CGCGATGCCG CTGATGCTGG CCGTGGGCGT GGCCTTCCAC
ATCTACTACG TGATCGCGTG GCGGGCGGGC GTGGCCGACA TGCTGGCCTC GAGCCTGACC
CGGGCGATCT TCTTCTCGGC GCTGACGACC GGGACGGCGT TCGGCTCGCT GGTCCTGTCG
AGCCATCCGG GCACCGCGAG CATGGGCAAG CTGCTCGCGC TCTCGCTGTT CTTCACGCTG
GTGGCGGCCT TCTTCATCGT GCCGGCCTTC CTCGGCCCGC CGCCGAAGGC GAAGGGGAAG
GACGCGCCCG CCCGGGCCCC GGAGCCGGTG CGGGAGCCCG AGGGCGTGGT GGCGCGCCGG
GCGGTGTGA
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| Protein sequence | MIERLVALSV RHRWLVLLAC LALTAASALT AAHRFRINTD VERLIAPDVG WRQDEIQFEK
AFPQRSNLLV AVIDARTPEQ ADEAATRLAE ALSQHRSRLP VVYRPDGGPF FDKNGFLLMP
QKELEQTTER LVQQQGLLGP LAADPSLRGI LQAMGLGAQG VKGGQAKIED LTSPLGQLRD
TFEKALRGEP ARLSWQLLLS GGKAETGDLR RFVITQPRLD FDELQPGADA SALIRKTARD
LHLTPQDGVT VRLTGQVAVA DDEFATLSDD ALLNNSVTVG AIVLFLWLAL RSPSLVVAVI
ITTFAGLIVT AALGLLMVGE LNPISVAFAA LFVGLGIDFG IQFAVRYRAD RFVQPDLAKA
IRSAAHGVGW SLTLAAVSLL AGFFSFLPTE FRGVSELGLI AGVGMIVAYL FALTLLPALI
AVFKPRGEKE EVGTASLAKV DHWIIQNRKL VLVLTGLVTV AGLPLLYYLP FDSNPMHLRS
PKVESVATYL DLAKDPATSP NTIDVLVPNR DAVRPMAERL RALPIVANVI DIDTFVPLDQ
DQKLATIEDA ASVLGPVLNP PRVAPPPSDR DVVQALKSAS GALRGIAGKG ESAPEKEVLA
FTDTLDRLAE ASPQVREAAA AATVPDLKGL LARLRGLLSP EKITLESLPE QIRSEWIAKD
GRARLEVQPK GNSNDNTVLR RFSKEVLSVA PHATGAPIAT TRSSSTILGA FIEAGALALL
SIFVILSVAL RRPWDVAMAL GPLVLATLWT LEALYLIGMP LNFANIIAMP LMLAVGVAFH
IYYVIAWRAG VADMLASSLT RAIFFSALTT GTAFGSLVLS SHPGTASMGK LLALSLFFTL
VAAFFIVPAF LGPPPKAKGK DAPARAPEPV REPEGVVARR AV
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