Gene M446_6315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6315 
Symbol 
ID6129784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6940447 
End bp6941496 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID641646411 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001773015 
Protein GI170744360 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.008113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGC CGCGCCGCTT CTTCCAGCCC CTCGCCACCG GGGCGCCCGC CCCGTTCCGC 
GACCTGCCGG TGCGCCTCGA GCGGATGATC CACTTCGTGC CGCCCCACAA CGACAAGGTC
CGGGCTCGGG TGCCGGACCT CGCCAGCCAG GTCGACGTGG TGCTGGGCAA CTTGGAGGAC
GCGGTCCCGG CCGACCAGAA GCTCGCCGCG CGCAAGGGCT TCATCGCCAT GGCGAAGGCC
ACCGACTTCG CGGCGGCCGG CACCGGCCTG TGGACGCGCA TCAATGCCCT CAACAGCCCC
TGGATCCTCG ACGACCTGAT CGACATCGTC GGCGAGGTCG GAGACCGGCT CGACGTCGTG
ATGGTGCCCA AGGTCGAGGG GCCCTGGGAC ATCCACTACA TCGACCAGCT CCTCGCCCAG
CTCGAGGCGC GGGCCGGGAT CGCCAAGCCG ATCCTGGTCC ACGCCATCCT GGAGACGGCC
GAGGGCGTGG CCAACGTCGA CGCCATCGCC TGCGCCTCGC CGCGCATGCA CGGGATGAGC
CTGGGCCCGG CCGACCTCGC GGCCTCCCGC GGCATGAAGA CGACCCGGGT CGGCGGCGGC
CACCCGGATT ACCGCGTCCT CGCCGACCCG GCCGAGGGCG GGGCCGCGCG GGCGAGCGCG
CAGCAGGATC TCTGGCACTA CACCATCGCC AAGATGGTCG ATGCCTGCCA GGCGAACGGC
ATCAAGGCCT TCTACGGCCC CTTCGGCGAC TTCTCCGACG CCGCCGCCTG CGAGGCGCAG
TTCCGCAACG CCTTCCTGAT GGGCTGCGCC GGCGCCTGGA CGCTGCATCC GAGCCAGGTC
GCCATCGCCA AGGCGGTGTT CGCGCCGGAC CCGGCCGAGG TCGCGTTCGC CACGCGCATC
CTGGCGGCCA TGCCGGACGG CACCGGCGCC GTGATGATCG ACGGCAAGAT GCAGGACGAC
GCGACCTGGA AGCAGGCGCG GGTGATCGTG GACCTCGCCC GGCTCGTCGC CGCCAAGGAT
CCCGACCTCG CCAAAAGCTA CGGGCTCTGA
 
Protein sequence
MKLPRRFFQP LATGAPAPFR DLPVRLERMI HFVPPHNDKV RARVPDLASQ VDVVLGNLED 
AVPADQKLAA RKGFIAMAKA TDFAAAGTGL WTRINALNSP WILDDLIDIV GEVGDRLDVV
MVPKVEGPWD IHYIDQLLAQ LEARAGIAKP ILVHAILETA EGVANVDAIA CASPRMHGMS
LGPADLAASR GMKTTRVGGG HPDYRVLADP AEGGAARASA QQDLWHYTIA KMVDACQANG
IKAFYGPFGD FSDAAACEAQ FRNAFLMGCA GAWTLHPSQV AIAKAVFAPD PAEVAFATRI
LAAMPDGTGA VMIDGKMQDD ATWKQARVIV DLARLVAAKD PDLAKSYGL