Gene M446_6250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6250 
Symbol 
ID6134703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6868383 
End bp6869624 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content71% 
IMG OID641646345 
ProductABC transporter substrate-binding protein 
Protein accessionYP_001772950 
Protein GI170744295 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0435582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAC GCCAGCGGCG GACCACGGGT CGCGCCCTCC TCGCCCCGCT CGCCGCCCTC 
GCCCTCGCCG GGGCGGCCCG GGCGGAGGAG CCCGTCCTCA CCGACGGCAA GGTCAAGCTC
GCGGTCCTCA CCGACATGTC GAGCGTCTAC GCCGATTCGA CCGGCCGCGG CTCGCTCATC
GCGGCCGAGA TGGCGGTGCG GGATTTCGGC GGCACGATCG GCGGAAGGCC GATCGAGGTG
GTCTCCGCCG ATCACCAGAA CAAGCCGGAT GTCGGCTCGA ACATCGCCCG GCAATGGTAC
GACCGGGACG GCGTCGACGT GATCCTCGAC GTGCCGACCT CCTCGGTGGC GCTCGCGGTC
CAGCAGATCG CCAGGGAGAA GGGCAGGATC CTGATCGTGT CCGGGGGCGG CACCTCGGAC
CTGACCGGGC CGGCCTGCTC GCCGACCGGC CTGCACTGGA CCTACGACAC CTACGCGCTG
TCCCACGTCT CGGGCCAGGC GGCGGTGAAG CGGGGCCTCG ACACCTGGGC CTTCGTGACG
GCGGATTACG CCTTCGGCCA CGCCCTGGAG CGGGACGGCG CCGCCGAGGT GAAGCGCTCC
GGCGGCAAGG TGCTGTCGAC CGTGCGGGCG CCCTTCGCCA CCGCCGACTT CTCGTCCTTC
CTGATCCAGG CGCAGGGATC GGGGGCCAAG CTCGTCGCCT TCGCCAATGC GGGCGGCGAC
ACGGTCAACG CGATCAAGCA GGCGCACGAA TTCGGCATCG TCCAGGGCGG GCAGACCCTG
CTCGCCCTCC TCATCAACAT CGACGACGTG CACAGCCTCG GCATCGACGT GGCGCAGGGG
CTCCTCCTGA CCACGGCCTT CTACTGGGAC CGGGACGAGG CGACCCGCGC CTTCGCGACG
CGCTTCAAGC AGGCCTACGG GCTGATGCCG ACCATGCATC AGGCGGGGGT CTACTCGGCG
GTCACCCATT ACCTGAAGGC CGTGCGGGAG GCCGGCACCG ACGACGCCCT CAAGGTCGTC
GCCAAGATGC GGGAGATGCC GGTGGACGAC ATGTTCGCGA GGGGCGGCCG GGTGCGCGAG
GACGGGCGCA TGGTCCACGA CATGTACCTG ATGCAGGTGA AGACGCCGCA GGAATCGAAG
GGCGAGTGGG ACCTCTACAA GCTCCTGGCG ACGGTCCCCG GCGACGAGGC CTTCCGGCCC
CTGGCCGAGG GGGGCTGCCC GCTGGTGAAG GCGGCGCGGT GA
 
Protein sequence
MPARQRRTTG RALLAPLAAL ALAGAARAEE PVLTDGKVKL AVLTDMSSVY ADSTGRGSLI 
AAEMAVRDFG GTIGGRPIEV VSADHQNKPD VGSNIARQWY DRDGVDVILD VPTSSVALAV
QQIAREKGRI LIVSGGGTSD LTGPACSPTG LHWTYDTYAL SHVSGQAAVK RGLDTWAFVT
ADYAFGHALE RDGAAEVKRS GGKVLSTVRA PFATADFSSF LIQAQGSGAK LVAFANAGGD
TVNAIKQAHE FGIVQGGQTL LALLINIDDV HSLGIDVAQG LLLTTAFYWD RDEATRAFAT
RFKQAYGLMP TMHQAGVYSA VTHYLKAVRE AGTDDALKVV AKMREMPVDD MFARGGRVRE
DGRMVHDMYL MQVKTPQESK GEWDLYKLLA TVPGDEAFRP LAEGGCPLVK AAR