| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6245 |
|---|
| Symbol | |
|---|
| ID | 6129666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6863029 |
|---|
| End bp | 6863913 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641646341 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001772946 |
|---|
| Protein GI | 170744291 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0747669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG TGCGCTGCAT GCGGGCGTTC GTTGCGACGG TGCGGGCCGG TTCGATGAGC
GCCGCTGCGG CGGAGCTGGG GCAATCTCCG GCAATGGTCG GACAGCAGAT CGCGGCGCTG
GAGGAACGCC TCGGCACGCG CCTTCTGAAC CGCACGACGC GGCGTCAAAG CCTGACGGAT
TTCGGGGCGA GCTATGTCGA GCAGTGCCGC GACATTCTGG AGCGCATCGC GCTTGCCCAA
GAGGCCGCGG AGCTTCAGCA GACGCGGGTA CAGGGTCGAT TGCGGATCAC GGCGCCCACC
ACCTTCGGCG CAGAGGCGCT GATGCCGGCA CTTGGCGGCT ATCGACTGAC CGCACCCGAT
GTGGAACTCG ACATCACCCT GTCGGATCGC AATGTCGATC TCGTCGAGGA AGGCTTCGAT
CTCGCCTTCC GCATCGGCGC GATCCAGGAC AGCGCCATGA TCGCCAGACC TCTGGCGCCC
TATCGCATGG TGGTCTGCGC CGCGCCCGAC TACCTCGCCC GCCGAGGAAC GCCGATCCAT
CCGGACGACC TGGAAGGCCA TGAAGCCATC GCTTTCACGC CTTCGGCGCG TTCGCCGTGG
ACATTCGCGA GGGGTGACGA CGAGAGAGCG GTGACACCTC CACGCATGAT CACCGTGAAC
AGCGGCCAGG CAGTCCGCGC AGCGGCGCGC GCGGGCCTCG GCATCATCAT GCAGCCGGAG
ATCCTCGTGC GGCGCGATAT GGAGACCGGC TGCCTTGTCC GGCTGTTCCC GGAGTGGCGG
CTGGGTGACA GACCGATGTG GCTTCTCTAC CACCGTGACC GGCGCATGAC GCCACGCCTG
CGCAGCTTCA TCTCCTTCGC GACCGCGGCC TTCGGTGTCG CGTGA
|
|---|
| Protein sequence | MDIVRCMRAF VATVRAGSMS AAAAELGQSP AMVGQQIAAL EERLGTRLLN RTTRRQSLTD
FGASYVEQCR DILERIALAQ EAAELQQTRV QGRLRITAPT TFGAEALMPA LGGYRLTAPD
VELDITLSDR NVDLVEEGFD LAFRIGAIQD SAMIARPLAP YRMVVCAAPD YLARRGTPIH
PDDLEGHEAI AFTPSARSPW TFARGDDERA VTPPRMITVN SGQAVRAAAR AGLGIIMQPE
ILVRRDMETG CLVRLFPEWR LGDRPMWLLY HRDRRMTPRL RSFISFATAA FGVA
|
|---|
| |