Gene M446_6199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6199 
Symbol 
ID6130019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6811529 
End bp6813751 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content75% 
IMG OID641646290 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 
Protein accessionYP_001772901 
Protein GI170744246 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGAAGA TGGTCGATTC GTTTGCCCGC GCGGACGGCG CCTCGCCCGG CGAGGACATG 
CCCGCGGAGG AGAGGCGCCT GCGGGAACTC GCGGCCTACC GGATCGCCGA CAGCGCGCCC
GAACCGGAGA TCGACCGCAT CGCCTCCCTG GCCGCCGCCC TGTTCGGGAC GCCCTGGGCC
GCCGTGACGC TGATCGGCGA GGACACGCAG TGGCTCAAGG CGCGCCACGG CCTCGACCTG
CCGCGGACGC CCCGATCGGT CTCCTTCTGC ACGCACACGA TCGAGAGCGA CGAGGTCATG
GTGGTCCCGG ATGCCAGCCG GGACCCGCGC TTCCGCGACA ATCCGCTGGT GCGGGGCGAC
CTCGCCCTGC GCTTCTACGC GGGCGCGCCC CTGGTCACGC CGAGCGGGGC GCGCATCGGG
GCGATCTGCG TCCTCGACCA TGCCCCGCGC CCCGCCCTCG ACGCGGCCGG GCGGGGGCGC
CTCGCCGACC TCGCGCGCCT GATGATGACC CAGCTCGACC TGCGGCGCCA GGGCCGGCGC
GACGCGGAGA TCACGCGCTT CGCGGCCGCC ACGGAACTCG CGCTCCTCTC CGTCGATCCG
GACGGCCGCA TCGGCTTCGC CAACCAGGCG AGCGAGCGCC TCTTCGGCTA CGGGCCGGGC
GACCTCGTCG GGCTGCCGGT CGAGGTCATC GTGCCGCAGC GCGCCCGGGC CCGCCACCGC
GAAGGCATGG CCCGCGTCCT CGGGGAGGGC GGGACGCGCC TCGCCGGCCG GACCGTGCAA
TTCACCGGCC TGCGCCGGGA CGGCAGCGAG GTGGCGGTCG AACTCACGCT CTCGGTCTGG
ACCGGCGCCG AGGGGATGTG CATGGGGGCG GTGATCCGGG ACGTCGCGGA GGGCGACGGG
CGGCTCCTCA ACCTCGCCGA CCGCGACCCC GTCACCGGCC TGCCGAACCG GCGCCACCTC
ACCGAGATCC TGGCCGCCCG CCTGGTCGCC GGGCCGGTCG CCGCGCTGCT GCTGCACCTC
GAGGGGCTCA AGGAAGCCTC GGAGGAGCTC GGGCACGGGC TCGGGGACGC CCTGGCCCAG
GCCGCGACGA TCCGGCTCCT CGCGGCCCTC GACGGCGACG CCACCGCGGC GCGCTGGGAC
GGGGACCGCA TGGCCGTCCT GGTGCCCGAT CCGGAGCCCG CCGGGCTCCT CGCCCGGGCC
GCGACGCTGC AGGACGCCTT CGCGGGGGCC TTCGAGGTCA GCGGGCGCAC CGTGCATCTC
GGCCTGAGCC TCGGCATCGC CGTGGCGCCG CGGCACGGCG AGCGGGCCGA GGAACTCTTG
GCCAATGCCG ACCTCGCGCT CAGCCGCGCC CGGCACGGGG ACGGGCGCGG GGTGCGCGTC
TACGATCCGG CCATGCGCGC CGAGATCGAG TCGCGCCGCG CCCTCCAGAA CGACCTGCGC
CGCGCCCTGG AGCGGGGCGA ACTCGTCCTG CACTACCAGC CGCAGGTGCT CCTGCGCAGC
GGCGGCATCG TGGGCGCCGA GGCGCTGGTA CGCTGGCAGC ACCCGGAGCG GGGGCTGCTC
TACCCAGGCG ACTTCCTGCA CGCGGTCGAG TCGAGCACGC TCGCCCTCCA TCTCGGCTGG
TGGACGGTGG ACGAGGTCTG CCGGCAGATC GCCGCCTGGC GCGCCGCCGG CCTGCCCCCG
GTGCGCATCG CCCTGAACCT CTACGCGGCC CAGTTCCGCG CCGGCACCCT CGGGCAGGTG
GTCGAGGAGG CGCTCGCCCG CCACGGCGTC CCGCCCACCC TGCTCGAACT GGAGGTGACC
GAAACCATCG CGCTCCAGAA CGACGGGGCC GACCTCGAGC CGATCCGCGC CCTGCGGGAG
CGCGGGGTCG GCATCGCCTT CGACGATTTC GGCACCGGCT ACGCCGCGCT CAGCACCCTC
AAGCGCTTCC CCCTGAGCAA GCTGAAGATC GACCGCGGCT TCGTGCGCGA CATCCTCTCC
GAGCCCCACG ACGAGGCGAT CGTCGGGGCC GTGCTGTCGA TCGGCCGCCG CCTCGCCCTC
GACGTGGTGG CGGAGGGGAT CGAGACCCGG GACCACGTCG CGGCCCTGCT GCGGCTCGGA
TGCGAGTTCG GCCAGGGCTA CCTGTTCGGG CGCGCCATGC CCCCCGCCGC CTTCGCCGAG
CGCCTCGGCG CCGAGGCCGC GTCCCGCGAG GCCCTCACCC TCCTGCGCGT CGCCAGGGCC
TGA
 
Protein sequence
MGKMVDSFAR ADGASPGEDM PAEERRLREL AAYRIADSAP EPEIDRIASL AAALFGTPWA 
AVTLIGEDTQ WLKARHGLDL PRTPRSVSFC THTIESDEVM VVPDASRDPR FRDNPLVRGD
LALRFYAGAP LVTPSGARIG AICVLDHAPR PALDAAGRGR LADLARLMMT QLDLRRQGRR
DAEITRFAAA TELALLSVDP DGRIGFANQA SERLFGYGPG DLVGLPVEVI VPQRARARHR
EGMARVLGEG GTRLAGRTVQ FTGLRRDGSE VAVELTLSVW TGAEGMCMGA VIRDVAEGDG
RLLNLADRDP VTGLPNRRHL TEILAARLVA GPVAALLLHL EGLKEASEEL GHGLGDALAQ
AATIRLLAAL DGDATAARWD GDRMAVLVPD PEPAGLLARA ATLQDAFAGA FEVSGRTVHL
GLSLGIAVAP RHGERAEELL ANADLALSRA RHGDGRGVRV YDPAMRAEIE SRRALQNDLR
RALERGELVL HYQPQVLLRS GGIVGAEALV RWQHPERGLL YPGDFLHAVE SSTLALHLGW
WTVDEVCRQI AAWRAAGLPP VRIALNLYAA QFRAGTLGQV VEEALARHGV PPTLLELEVT
ETIALQNDGA DLEPIRALRE RGVGIAFDDF GTGYAALSTL KRFPLSKLKI DRGFVRDILS
EPHDEAIVGA VLSIGRRLAL DVVAEGIETR DHVAALLRLG CEFGQGYLFG RAMPPAAFAE
RLGAEAASRE ALTLLRVARA