Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6199 |
Symbol | |
ID | 6130019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6811529 |
End bp | 6813751 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641646290 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_001772901 |
Protein GI | 170744246 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGAAGA TGGTCGATTC GTTTGCCCGC GCGGACGGCG CCTCGCCCGG CGAGGACATG CCCGCGGAGG AGAGGCGCCT GCGGGAACTC GCGGCCTACC GGATCGCCGA CAGCGCGCCC GAACCGGAGA TCGACCGCAT CGCCTCCCTG GCCGCCGCCC TGTTCGGGAC GCCCTGGGCC GCCGTGACGC TGATCGGCGA GGACACGCAG TGGCTCAAGG CGCGCCACGG CCTCGACCTG CCGCGGACGC CCCGATCGGT CTCCTTCTGC ACGCACACGA TCGAGAGCGA CGAGGTCATG GTGGTCCCGG ATGCCAGCCG GGACCCGCGC TTCCGCGACA ATCCGCTGGT GCGGGGCGAC CTCGCCCTGC GCTTCTACGC GGGCGCGCCC CTGGTCACGC CGAGCGGGGC GCGCATCGGG GCGATCTGCG TCCTCGACCA TGCCCCGCGC CCCGCCCTCG ACGCGGCCGG GCGGGGGCGC CTCGCCGACC TCGCGCGCCT GATGATGACC CAGCTCGACC TGCGGCGCCA GGGCCGGCGC GACGCGGAGA TCACGCGCTT CGCGGCCGCC ACGGAACTCG CGCTCCTCTC CGTCGATCCG GACGGCCGCA TCGGCTTCGC CAACCAGGCG AGCGAGCGCC TCTTCGGCTA CGGGCCGGGC GACCTCGTCG GGCTGCCGGT CGAGGTCATC GTGCCGCAGC GCGCCCGGGC CCGCCACCGC GAAGGCATGG CCCGCGTCCT CGGGGAGGGC GGGACGCGCC TCGCCGGCCG GACCGTGCAA TTCACCGGCC TGCGCCGGGA CGGCAGCGAG GTGGCGGTCG AACTCACGCT CTCGGTCTGG ACCGGCGCCG AGGGGATGTG CATGGGGGCG GTGATCCGGG ACGTCGCGGA GGGCGACGGG CGGCTCCTCA ACCTCGCCGA CCGCGACCCC GTCACCGGCC TGCCGAACCG GCGCCACCTC ACCGAGATCC TGGCCGCCCG CCTGGTCGCC GGGCCGGTCG CCGCGCTGCT GCTGCACCTC GAGGGGCTCA AGGAAGCCTC GGAGGAGCTC GGGCACGGGC TCGGGGACGC CCTGGCCCAG GCCGCGACGA TCCGGCTCCT CGCGGCCCTC GACGGCGACG CCACCGCGGC GCGCTGGGAC GGGGACCGCA TGGCCGTCCT GGTGCCCGAT CCGGAGCCCG CCGGGCTCCT CGCCCGGGCC GCGACGCTGC AGGACGCCTT CGCGGGGGCC TTCGAGGTCA GCGGGCGCAC CGTGCATCTC GGCCTGAGCC TCGGCATCGC CGTGGCGCCG CGGCACGGCG AGCGGGCCGA GGAACTCTTG GCCAATGCCG ACCTCGCGCT CAGCCGCGCC CGGCACGGGG ACGGGCGCGG GGTGCGCGTC TACGATCCGG CCATGCGCGC CGAGATCGAG TCGCGCCGCG CCCTCCAGAA CGACCTGCGC CGCGCCCTGG AGCGGGGCGA ACTCGTCCTG CACTACCAGC CGCAGGTGCT CCTGCGCAGC GGCGGCATCG TGGGCGCCGA GGCGCTGGTA CGCTGGCAGC ACCCGGAGCG GGGGCTGCTC TACCCAGGCG ACTTCCTGCA CGCGGTCGAG TCGAGCACGC TCGCCCTCCA TCTCGGCTGG TGGACGGTGG ACGAGGTCTG CCGGCAGATC GCCGCCTGGC GCGCCGCCGG CCTGCCCCCG GTGCGCATCG CCCTGAACCT CTACGCGGCC CAGTTCCGCG CCGGCACCCT CGGGCAGGTG GTCGAGGAGG CGCTCGCCCG CCACGGCGTC CCGCCCACCC TGCTCGAACT GGAGGTGACC GAAACCATCG CGCTCCAGAA CGACGGGGCC GACCTCGAGC CGATCCGCGC CCTGCGGGAG CGCGGGGTCG GCATCGCCTT CGACGATTTC GGCACCGGCT ACGCCGCGCT CAGCACCCTC AAGCGCTTCC CCCTGAGCAA GCTGAAGATC GACCGCGGCT TCGTGCGCGA CATCCTCTCC GAGCCCCACG ACGAGGCGAT CGTCGGGGCC GTGCTGTCGA TCGGCCGCCG CCTCGCCCTC GACGTGGTGG CGGAGGGGAT CGAGACCCGG GACCACGTCG CGGCCCTGCT GCGGCTCGGA TGCGAGTTCG GCCAGGGCTA CCTGTTCGGG CGCGCCATGC CCCCCGCCGC CTTCGCCGAG CGCCTCGGCG CCGAGGCCGC GTCCCGCGAG GCCCTCACCC TCCTGCGCGT CGCCAGGGCC TGA
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Protein sequence | MGKMVDSFAR ADGASPGEDM PAEERRLREL AAYRIADSAP EPEIDRIASL AAALFGTPWA AVTLIGEDTQ WLKARHGLDL PRTPRSVSFC THTIESDEVM VVPDASRDPR FRDNPLVRGD LALRFYAGAP LVTPSGARIG AICVLDHAPR PALDAAGRGR LADLARLMMT QLDLRRQGRR DAEITRFAAA TELALLSVDP DGRIGFANQA SERLFGYGPG DLVGLPVEVI VPQRARARHR EGMARVLGEG GTRLAGRTVQ FTGLRRDGSE VAVELTLSVW TGAEGMCMGA VIRDVAEGDG RLLNLADRDP VTGLPNRRHL TEILAARLVA GPVAALLLHL EGLKEASEEL GHGLGDALAQ AATIRLLAAL DGDATAARWD GDRMAVLVPD PEPAGLLARA ATLQDAFAGA FEVSGRTVHL GLSLGIAVAP RHGERAEELL ANADLALSRA RHGDGRGVRV YDPAMRAEIE SRRALQNDLR RALERGELVL HYQPQVLLRS GGIVGAEALV RWQHPERGLL YPGDFLHAVE SSTLALHLGW WTVDEVCRQI AAWRAAGLPP VRIALNLYAA QFRAGTLGQV VEEALARHGV PPTLLELEVT ETIALQNDGA DLEPIRALRE RGVGIAFDDF GTGYAALSTL KRFPLSKLKI DRGFVRDILS EPHDEAIVGA VLSIGRRLAL DVVAEGIETR DHVAALLRLG CEFGQGYLFG RAMPPAAFAE RLGAEAASRE ALTLLRVARA
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